RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ADARB2Q9NS39 739 aaKnown RBP18.87■□□□□ 0.61
PTPN21-208ENST00000556564 MYL1P05976 194 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 CEP128Q6ZU80 1094 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 CYFIP1Q7L576 1253 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 SFR1Q86XK3 245 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 ATRIPQ8WXE1 791 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 LXNQ9BS40 222 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 SLC9A2Q9UBY0 812 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 C3P01024 1663 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 GFPT2O94808 682 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 SFNP31947 248 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 ZNF543Q08ER8 600 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 ANKRD13AQ8IZ07 590 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 GSDMBQ8TAX9 411 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 MAIP1Q8WWC4 291 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 PRMT6Q96LA8 375 aaPredicted RBP18.86■□□□□ 0.61
PTPN21-208ENST00000556564 FAM20AQ96MK3 541 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 DYNC1I1O14576 645 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 SH3BP5O60239 455 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 CASP14P31944 242 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 MAN2A1Q16706 1144 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 ZNF710Q8N1W2 664 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 RWDD2AQ9UIY3 292 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 QARSP47897 775 aaKnown RBP18.86■□□□□ 0.61
PTPN21-208ENST00000556564 TUBB4BP68371 445 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 ZBTB16Q05516 673 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 SREBF2Q12772 1141 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 CCT6BQ92526 530 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 ZNF233A6NK53 670 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 CLDN3O15551 220 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 CASP1P29466 404 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 RESP18Q5W5W9 173 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 GABPB2Q8TAK5 448 aaPredicted RBP18.86■□□□□ 0.61
PTPN21-208ENST00000556564 TEX13BQ9BXU2 312 aa18.86■□□□□ 0.61
PTPN21-208ENST00000556564 EPB41L4AQ9HCS5 686 aaPredicted RBP18.86■□□□□ 0.61
PTPN21-208ENST00000556564 SPDYE16A6NNV3 312 aaPredicted RBP18.85■□□□□ 0.61
PTPN21-208ENST00000556564 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
PTPN21-208ENST00000556564 P4HBP07237 508 aaKnown RBP18.85■□□□□ 0.61
PTPN21-208ENST00000556564 MXI1P50539 228 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 ALCAMQ13740 583 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 SPDYE2Q495Y8 402 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 OR6B3Q8NGW1 331 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 TBC1D8O95759 1140 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 MCPH1Q8NEM0 835 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 CTNND1O60716 968 aaKnown RBP18.85■□□□□ 0.61
PTPN21-208ENST00000556564 MESDQ14696 234 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 SURF1Q15526 300 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 IFT20Q8IY31 132 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 TBC1D31Q96DN5 1066 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 FAM184BQ9ULE4 1060 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 PPARDQ03181 441 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 C4orf50Q6ZRC1 276 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 VCPKMTQ9H867 229 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 RASA1P20936 1047 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 FAM133AQ8N9E0 248 aa18.85■□□□□ 0.61
PTPN21-208ENST00000556564 TYW5A2RUC4 315 aaKnown RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA6CA6NDK9 693 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA6BA6NDN3 693 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 MED7O43513 233 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA6DP0CG33 693 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 URGCPQ8TCY9 931 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 PSPC1Q8WXF1 523 aaKnown RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 EIF2AK1Q9BQI3 630 aaKnown RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA6AQ9NYA3 693 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 EEF1GP26641 437 aaKnown RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 RCAN1P53805 252 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 RFX6Q8HWS3 928 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 SLC38A10Q9HBR0 1119 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 PP2D1A8MPX8 630 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 H2AFZP0C0S5 128 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 H2AFVQ71UI9 128 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 PDZD4Q76G19 769 aaPredicted RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 RYBPQ8N488 228 aaPredicted RBP18.84■□□□□ 0.61
PTPN21-208ENST00000556564 KBTBD13C9JR72 458 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 KIF11P52732 1056 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 RBL2Q08999 1139 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 ZNF653Q96CK0 615 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 GCNAQ96QF7 691 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 NYAP2Q9P242 653 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 PRR12Q9ULL5 1215 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
PTPN21-208ENST00000556564 GPR75-ASB3A0A0A6YYF3 556 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 ARHGEF37A1IGU5 675 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 DYNC1LI2O43237 492 aaPredicted RBP18.83■□□□□ 0.61
PTPN21-208ENST00000556564 VPS41P49754 854 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 CLUL1Q15846 466 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.61
PTPN21-208ENST00000556564 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 SIX6OS1Q8N1H7 587 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.83■□□□□ 0.61
PTPN21-208ENST00000556564 JPH1Q9HDC5 661 aaPredicted RBP18.83■□□□□ 0.61
PTPN21-208ENST00000556564 PSMC5P62195 406 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 OR6B2Q6IFH4 312 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 FAM213AQ9BRX8 229 aa18.83■□□□□ 0.61
PTPN21-208ENST00000556564 GPRC5AQ8NFJ5 357 aa18.83■□□□□ 0.6
PTPN21-208ENST00000556564 TNFAIP2Q03169 654 aa18.83■□□□□ 0.6
PTPN21-208ENST00000556564 VPS37BQ9H9H4 285 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms