RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 MYBP10242 640 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 SLC18A3Q16572 532 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 SBK1Q52WX2 424 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 PIGOQ8TEQ8 1089 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 ANKS1AQ92625 1134 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 CABS1Q96KC9 395 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 SF3B3Q15393 1217 aaKnown RBP18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 CPLX4Q7Z7G2 160 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 CCDC25Q86WR0 208 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 CYP2W1Q8TAV3 490 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 DNAJC19Q96DA6 116 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 MTMR9Q96QG7 549 aa18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 NOC2LQ9Y3T9 749 aaKnown RBP18.67■□□□□ 0.58
PPP4R3A-208ENST00000555462 POLD1P28340 1107 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 USP8P40818 1118 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 CCDC13Q8IYE1 715 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 GDF3Q9NR23 364 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 HDAC9Q9UKV0 1011 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 FGGP02679 453 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 CDC25CP30307 473 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 PRPHP41219 470 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 CDC37Q16543 378 aaPredicted RBP18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 MEI1Q5TIA1 1274 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 ADGRF4Q8IZF3 695 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 RBM46Q8TBY0 533 aaKnown RBP18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 CYFIP2Q96F07 1278 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 KRT13P13646 458 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 HOXA13P31271 388 aaPredicted RBP18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 CCDC121Q6ZUS5 278 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 PHLDB2Q86SQ0 1253 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 CEP72Q9P209 647 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
PPP4R3A-208ENST00000555462 MED24O75448 989 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 PCP11498 1178 aaKnown RBP18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 MAP2K2P36507 400 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 TNNC1P63316 161 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 GTF2IP78347 998 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 ZNF746Q6NUN9 644 aaPredicted RBP18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 SFR1Q86XK3 245 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 PKD2L1Q9P0L9 805 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 FGFR1OPO95684 399 aaKnown RBP18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 SHBGP04278 402 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 PLTPP55058 493 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 ZNF844Q08AG5 666 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 ITGB3BPQ13352 177 aaPredicted RBP18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 B4GALNT4Q76KP1 1039 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 RGL1Q9NZL6 768 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 SNX24Q9Y343 169 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
PPP4R3A-208ENST00000555462 DNM1LO00429 736 aa18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 KIF4AO95239 1232 aa18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 HNRNPH3P31942 346 aaKnown RBP18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 ZC2HC1CQ53FD0 456 aaPredicted RBP18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 FIGNQ5HY92 759 aa18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 TAF1DQ9H5J8 278 aaPredicted RBP18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 PCDHAC2Q9Y5I4 1007 aa18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 TIAM2Q8IVF5 1701 aa18.64■□□□□ 0.58
PPP4R3A-208ENST00000555462 LAD1O00515 517 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 MYL1P05976 194 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 LRRC63Q05C16 580 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 COG2Q14746 738 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 CAVIN3Q969G5 261 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 CUEDC2Q9H467 287 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 PSTPIP2Q9H939 334 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 DDX20Q9UHI6 824 aaKnown RBP18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 GCNT3O95395 438 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 TRIM49P0CI25 452 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 TRIM49CP0CI26 452 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 LRRC14Q15048 493 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 CPNE8Q86YQ8 564 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 RAB34Q9BZG1 259 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
PPP4R3A-208ENST00000555462 PPP1R12BO60237 982 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 UCHL3P15374 230 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 CDK17Q00537 523 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 THOC1Q96FV9 657 aaKnown RBP18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 SPDYE3A6NKU9 549 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 CETN3O15182 167 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 SETQ01105 290 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 FAM133BQ5BKY9 247 aaKnown RBP18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 PALB2Q86YC2 1186 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 JMJD4Q9H9V9 463 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 ARMCX3Q9UH62 379 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
PPP4R3A-208ENST00000555462 AKAP3O75969 853 aa18.62■□□□□ 0.57
PPP4R3A-208ENST00000555462 CYP2J2P51589 502 aa18.62■□□□□ 0.57
PPP4R3A-208ENST00000555462 KDM7AQ6ZMT4 941 aa18.62■□□□□ 0.57
PPP4R3A-208ENST00000555462 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
PPP4R3A-208ENST00000555462 ADAM33Q9BZ11 813 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms