RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CHST7Q9NS84 486 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 GFOD1Q9NXC2 390 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 CGGBP1Q9UFW8 167 aaPredicted RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 EMC9Q9Y3B6 208 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 MRPS23Q9Y3D9 190 aaKnown RBP3.11□□□□□ -1.91
CPSF6-207ENST00000551516 VCANP13611 3396 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 MUC3AQ02505 3323 aa3.11□□□□□ -1.91
CPSF6-207ENST00000551516 LAMA2P24043 3122 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 CUL9Q8IWT3 2517 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 SSU72P8A0A1W2PR75 194 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MEIS1O00470 390 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 GSC2O15499 205 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 VAMP4O75379 141 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 RFPL3O75679 317 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 STARD3NLO95772 234 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 GSNP06396 782 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 SNRPB2P08579 225 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 SNRPA1P09661 255 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF865P0CJ78 1059 aaPredicted RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 PABPC1P11940 636 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 ADMP35318 185 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 KCNJ6P48051 423 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 TNK2Q07912 1038 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 KIAA2012Q0VF49 1180 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 PABPC4Q13310 644 aaKnown RBP eCLIP3.1□□□□□ -1.913e-6■□□□□ 9
CPSF6-207ENST00000551516 SNW1Q13573 536 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 TKFCQ3LXA3 575 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 CCDC93Q567U6 631 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 FOXB2Q5VYV0 432 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 RNF43Q68DV7 783 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 GTF2IRD2BQ6EKJ0 949 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 C22orf34Q6ZV56 151 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 USP50Q70EL3 339 aaPredicted RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MCM10Q7L590 875 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 FAM214BQ7L5A3 538 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 TMC3Q7Z5M5 1100 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 GTF2IRD2Q86UP8 949 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 PNMA8AQ86V59 439 aaPredicted RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 NIM1KQ8IY84 436 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 RTKN2Q8IZC4 609 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MFSD4AQ8N468 514 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 CNBD1Q8NA66 436 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 DAGLBQ8NCG7 672 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 BTN2A2Q8WVV5 523 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 KCTD13Q8WZ19 329 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 NINJ1Q92982 152 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF622Q969S3 477 aaKnown RBP eCLIP3.1□□□□□ -1.914e-9■□□□□ 9.2
CPSF6-207ENST00000551516 ZBED3Q96IU2 234 aaPredicted RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 EXOC2Q96KP1 924 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 CAPNS2Q96L46 248 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MFSD14AQ96MC6 490 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 HEXIM2Q96MH2 286 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 ZDHHC15Q96MV8 337 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 GPR101Q96P66 508 aaPredicted RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 FMNL2Q96PY5 1086 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 IER2Q9BTL4 223 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 OSBPL1AQ9BXW6 950 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MRPL4Q9BYD3 311 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MCOLN1Q9GZU1 580 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 R3HDMLQ9H3Y0 253 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 CYP26B1Q9NR63 512 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 GPATCH2Q9NW75 528 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 POLLQ9UGP5 575 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 HACL1Q9UJ83 578 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 NOP58Q9Y2X3 529 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 ATP6V0A2Q9Y487 856 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 DICER1Q9UPY3 1922 aaKnown RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 ASTN2O75129 1339 aaPredicted RBP3.1□□□□□ -1.91
CPSF6-207ENST00000551516 MAP3K15Q6ZN16 1313 aa3.1□□□□□ -1.91
CPSF6-207ENST00000551516 FAM170BA6NMN3 283 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 CHL1O00533 1208 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 EFCAB14O75071 495 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 PRAMEF1O95521 474 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 F13BP05160 661 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 VIL1P09327 827 aaKnown RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF853P0CG23 659 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 PPP2R1AP30153 589 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 PRKAR2BP31323 418 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ECI1P42126 302 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GRIA2P42262 883 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 MASP1P48740 699 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF280AP59817 542 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GABREP78334 506 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 MAP2K1Q02750 393 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 MAP4K2Q12851 820 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 NFIAQ12857 509 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 CBX2Q14781 532 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 SF3B3Q15393 1217 aaKnown RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 C21orf62-AS1Q17RA5 79 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 DPY19L1Q2PZI1 675 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 YOD1Q5VVQ6 348 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GPAT2Q6NUI2 795 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF765Q7L2R6 523 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 SP8Q8IXZ3 490 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 DHX37Q8IY37 1157 aaKnown RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 C16orf71Q8IYS4 520 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF655Q8N720 491 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 DPF2Q92785 391 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GATA6Q92908 595 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 MFSD3Q96ES6 412 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms