RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ASB16Q96NS5 453 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 ZIM3Q96PE6 472 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 TRAPPC9Q96Q05 1148 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 YIPF3Q9GZM5 350 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 IQCGQ9H095 443 aaKnown RBP5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 HAUS4Q9H6D7 363 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 TMBIM4Q9HC24 238 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 ATP8A2Q9NTI2 1148 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 ECHDC1Q9NTX5 307 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 DNAJB12Q9NXW2 375 aaKnown RBP5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 FOXD3Q9UJU5 478 aaPredicted RBP5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 NFS1Q9Y697 457 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 SAR1BQ9Y6B6 198 aa5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.85□□□□□ -1.47
LSM3P2-201ENST00000551246 ZFYVE16Q7Z3T8 1539 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ARAP3Q8WWN8 1544 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TMEM94Q12767 1356 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MROH7-TTC4A0A0A0MT08 1334 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 RBM47A0AV96 593 aaKnown RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 E7ENQ6 273 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 H3BQV1 296 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TREHO43280 583 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ORC4O43929 436 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 NR1D1P20393 614 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ALDH3A1P30838 453 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 HSPA9P38646 679 aaKnown RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MARSP56192 900 aaKnown RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MRPS35P82673 323 aaKnown RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 GUCY1A3Q02108 690 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 NMIQ13287 307 aaPredicted RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TMED1Q13445 227 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 DSC3Q14574 896 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SPECC1Q5M775 1068 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 COL13A1Q5TAT6 717 aaPredicted RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 AGBL2Q5U5Z8 902 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SHC4Q6S5L8 630 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 RINLQ6ZS11 566 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MAATS1Q7Z4T9 603 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TRIM42Q8IWZ5 723 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ARFGAP2Q8N6H7 521 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 C1orf127Q8N9H9 656 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ZSCAN1Q8NBB4 408 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 GALNT6Q8NCL4 622 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ACRBPQ8NEB7 543 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MIPOL1Q8TD10 442 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SNX29Q8TEQ0 813 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TEKT4Q8WW24 435 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 EDARADDQ8WWZ3 215 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 FAM136AQ96C01 138 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 PPP1R14BQ96C90 147 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ZNF274Q96GC6 653 aaPredicted RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SCLT1Q96NL6 688 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TSC22D3Q99576 134 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MMADHCQ9H3L0 296 aaPredicted RBP5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 LZTFL1Q9NQ48 299 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 PLCB1Q9NQ66 1216 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 TRPV5Q9NQA5 729 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 PANK4Q9NVE7 773 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 ATXN10Q9UBB4 475 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 MAN1B1Q9UKM7 699 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SLC6A14Q9UN76 642 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 STARD13Q9Y3M8 1113 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 CLIC4Q9Y696 253 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 SLC4A7Q9Y6M7 1214 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 PIK3C2BO00750 1634 aa5.84□□□□□ -1.47
LSM3P2-201ENST00000551246 DLG5Q8TDM6 1919 aa5.84□□□□□ -1.48
LSM3P2-201ENST00000551246 MRC1P22897 1456 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 PTPRMP28827 1452 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 COL15A1P39059 1388 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 A0A1B0GVG6 124 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 PTPDC1A2A3K4 754 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM83GA6ND36 823 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 F6X3S4 739 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 ASAP2O43150 1006 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 TEX33O43247 280 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 PRC1O43663 620 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 BUB1BO60566 1050 aaPredicted RBP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 HSF2BPO75031 334 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 TRIM37O94972 964 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 KIF4AO95239 1232 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 GYPCP04921 128 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 ATP1A1P05023 1023 aaKnown RBP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 PEX19P40855 299 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 RANBP1P43487 201 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 CTCFP49711 727 aaPredicted RBP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 FXR1P51114 621 aaKnown RBP eCLIP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 HERVK_113P62684 666 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 PHEXP78562 749 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 INSM1Q01101 510 aaPredicted RBP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 AKAP17AQ02040 695 aaKnown RBP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 CUL4BQ13620 913 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 PLS1Q14651 629 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 SEPT2Q15019 361 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 RRS1Q15050 365 aaKnown RBP5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 HSP90AB4PQ58FF6 505 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 ARMC3Q5W041 872 aa5.83□□□□□ -1.48
LSM3P2-201ENST00000551246 ANO1Q5XXA6 986 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms