RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CREG2Q8IUH2 290 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 SNX12Q9UMY4 172 aa12.71□□□□□ -0.38
C11orf54-214ENST00000540113 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.38
C11orf54-214ENST00000540113 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 TACC1O75410 805 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 SPATA31C1P0DKV0 1188 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 MYBP10242 640 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 POLD1P28340 1107 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 LMAN1P49257 510 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 RAPGEF1Q13905 1077 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 WDR93Q6P2C0 686 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 MOXD1Q6UVY6 613 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-214ENST00000540113 SFR1Q86XK3 245 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-214ENST00000540113 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.7□□□□□ -0.38
C11orf54-214ENST00000540113 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 CNTNAP1P78357 1384 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 ZBTB39O15060 712 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 RAD17O75943 681 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 KCNA1Q09470 495 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 GIT2Q14161 759 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 KCTD19Q17RG1 926 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-214ENST00000540113 ASTE1Q2TB18 679 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-214ENST00000540113 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 GMLQ99445 158 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 LRRC1Q9BTT6 524 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 PACSIN1Q9BY11 444 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
C11orf54-214ENST00000540113 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 SPDYE3A6NKU9 549 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 EML1O00423 815 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 MSH4O15457 936 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 CHMP2AO43633 222 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 NR2F2P24468 414 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 HOXD13P35453 343 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 HNRNPH2P55795 449 aaKnown RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 CKAP4Q07065 602 aaKnown RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 PTPROQ16827 1216 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 TRIM58Q8NG06 486 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 PIGOQ8TEQ8 1089 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 OSBPL9Q96SU4 736 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 PRR12Q9ULL5 1215 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 PACSIN2Q9UNF0 486 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 JRKLQ9Y4A0 524 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 ABCB11O95342 1321 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 CLIC2O15247 247 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 LCA5LO95447 670 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 SLC9A1P19634 815 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 SREBF1P36956 1147 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 FAM193AP78312 1265 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 RUSC1Q9BVN2 902 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 CEP72Q9P209 647 aa12.69□□□□□ -0.38
C11orf54-214ENST00000540113 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 DMGDHQ9UI17 866 aaKnown RBP12.69□□□□□ -0.38
C11orf54-214ENST00000540113 FTCDO95954 541 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 ZNF76P36508 570 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 EPS15P42566 896 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 TUBB4BP68371 445 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 CTTNQ14247 550 aaKnown RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 Q4G0T1 1027 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 CCDC174Q6PII3 467 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 SLFN12Q8IYM2 578 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 A0A087X0T9 212 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 EIF3JO75822 258 aaKnown RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 FAM228BP0C875 321 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 CASP4P49662 377 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 KLHDC7AQ5VTJ3 777 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 ZNF277Q9NRM2 450 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
C11orf54-214ENST00000540113 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 DNM3Q9UQ16 869 aa12.68□□□□□ -0.38
C11orf54-214ENST00000540113 RBBP6Q7Z6E9 1792 aaKnown RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 CFBP00751 764 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 KLRC1P26715 233 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 FOXR2Q6PJQ5 311 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 FAM151AQ8WW52 585 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms