RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 NBPF4Q96M43 638 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 IPO9Q96P70 1041 aaKnown RBP5.15□□□□□ -1.59
ATM-217ENST00000531957 TACO1Q9BSH4 297 aaKnown RBP5.15□□□□□ -1.59
ATM-217ENST00000531957 MENTQ9BUN1 341 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 KLC2Q9H0B6 622 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 VPS11Q9H270 941 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 SIRPGQ9P1W8 387 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 ARHGAP20Q9P2F6 1191 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 NUB1Q9Y5A7 615 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 PCDHA9Q9Y5H5 950 aa5.15□□□□□ -1.59
ATM-217ENST00000531957 ZNF839A8K0R7 811 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 AMY2AP04746 511 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 PDE6AP16499 860 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 AMY2BP19961 511 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 ACVRL1P37023 503 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 SELENOPP49908 381 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 SERINC3Q13530 473 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 SMAD2Q15796 467 aaKnown RBP5.14□□□□□ -1.59
ATM-217ENST00000531957 BTBD8Q5XKL5 378 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 PKN3Q6P5Z2 889 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 OSTM1Q86WC4 334 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 CIR1Q86X95 450 aaPredicted RBP5.14□□□□□ -1.59
ATM-217ENST00000531957 KLHL36Q8N4N3 616 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 PCDH19Q8TAB3 1148 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 DEPDC7Q96QD5 511 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 SEMA4AQ9H3S1 761 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 BARX1Q9HBU1 254 aaPredicted RBP5.14□□□□□ -1.59
ATM-217ENST00000531957 JADE2Q9NQC1 790 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 KCND1Q9NSA2 647 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 CATSPERZQ9NTU4 200 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 RIC8BQ9NVN3 520 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 SNTG2Q9NY99 539 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 CBLCQ9ULV8 474 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 SRPK3Q9UPE1 567 aa5.14□□□□□ -1.59
ATM-217ENST00000531957 MRPS23Q9Y3D9 190 aaKnown RBP5.14□□□□□ -1.59
ATM-217ENST00000531957 NPEPPSL1A6NEC2 478 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 FAM90A27PA6NNH2 459 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 MAN2B1O00754 1011 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 CRTAMO95727 393 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 KNG1P01042 644 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 SLPIP03973 132 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 ENO2P09104 434 aaPredicted RBP5.13□□□□□ -1.59
ATM-217ENST00000531957 PTPN1P18031 435 aaKnown RBP5.13□□□□□ -1.59
ATM-217ENST00000531957 DNM2P50570 870 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 JAM2P57087 298 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 ICAM4Q14773 271 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 CDSNQ15517 529 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 ARHGEF18Q6ZSZ5 1173 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 Q8N1X5 172 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 FBXW5Q969U6 566 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 C8orf37Q96NL8 207 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 DHRS4Q9BTZ2 278 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 ADAM29Q9UKF5 820 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 PTPN22Q9Y2R2 807 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 TCAF1Q9Y4C2 921 aa5.13□□□□□ -1.59
ATM-217ENST00000531957 CCDC66A2RUB6 948 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 ARVCFO00192 962 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 GPR42O15529 346 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 PPP2CBP62714 309 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 PPP2CAP67775 309 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 GABREP78334 506 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 ST5P78524 1137 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 GPR19Q15760 415 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 Q6ZUG5 572 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 RALYLQ86SE5 291 aaKnown RBP5.12□□□□□ -1.59
ATM-217ENST00000531957 ZC3H7AQ8IWR0 971 aaKnown RBP5.12□□□□□ -1.59
ATM-217ENST00000531957 ZFPM1Q8IX07 1006 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 CISD2Q8N5K1 135 aaKnown RBP5.12□□□□□ -1.59
ATM-217ENST00000531957 PMFBP1Q8TBY8 1022 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 DNAJC7Q99615 494 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 ZNF747Q9BV97 191 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 HIRIP3Q9BW71 556 aaPredicted RBP5.12□□□□□ -1.59
ATM-217ENST00000531957 PDGFDQ9GZP0 370 aaPredicted RBP5.12□□□□□ -1.59
ATM-217ENST00000531957 SLC52A2Q9HAB3 445 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 NDOR1Q9UHB4 597 aa5.12□□□□□ -1.59
ATM-217ENST00000531957 ZNF561-AS1K7EIQ3 104 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 WNT9AO14904 365 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 MUSKO15146 869 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 RASGRP1O95267 797 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 ZNF888P0CJ79 500 aaPredicted RBP5.11□□□□□ -1.59
ATM-217ENST00000531957 CSF2RBP32927 897 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 EPHB4P54760 987 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 DBPQ10586 325 aaPredicted RBP5.11□□□□□ -1.59
ATM-217ENST00000531957 SRPK1Q96SB4 655 aaKnown RBP5.11□□□□□ -1.59
ATM-217ENST00000531957 MEGF9Q9H1U4 602 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 DEF6Q9H4E7 631 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 SMURF1Q9HCE7 757 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 ARHGAP28Q9P2N2 729 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 ATP23Q9Y6H3 246 aa5.11□□□□□ -1.59
ATM-217ENST00000531957 PRAMEF25A6NGN4 478 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 H0Y858 1186 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 MC4RP32245 332 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 RBL2Q08999 1139 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 FIGNQ5HY92 759 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 CRB2Q5IJ48 1285 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 FSTL4Q6MZW2 842 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 ZNF585AQ6P3V2 769 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 EP400NLQ6ZTU2 488 aa5.1□□□□□ -1.59
ATM-217ENST00000531957 C16orf59Q7L2K0 433 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms