RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 MYOCDQ8IZQ8 938 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 TSG101Q99816 390 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 CEP72Q9P209 647 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 UBE2SQ16763 222 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 CLEC10AQ8IUN9 316 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 GPC2Q8N158 579 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 RNF10Q8N5U6 811 aaKnown RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 RBM12Q9NTZ6 932 aaKnown RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 STIM2Q9P246 746 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 PCDHA2Q9Y5H9 948 aa17.12■□□□□ 0.33
USP35-206ENST00000530535 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
USP35-206ENST00000530535 GOLGA6CA6NDK9 693 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 GOLGA6DP0CG33 693 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 TNNI2P48788 182 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
USP35-206ENST00000530535 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
USP35-206ENST00000530535 HYIQ5T013 277 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 FAM76AQ8TAV0 307 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 GJA10Q969M2 543 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 NOX5Q96PH1 765 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 GOLGA6AQ9NYA3 693 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 SBF1O95248 1867 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 BUB1O43683 1085 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 TTLL1O95922 423 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 MATR3P43243 847 aaKnown RBP eCLIP17.11■□□□□ 0.33
USP35-206ENST00000530535 EPHB4P54760 987 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 SEPT2Q15019 361 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 EMBQ6PCB8 327 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 NLRC4Q9NPP4 1024 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 DDX25Q9UHL0 483 aaKnown RBP17.11■□□□□ 0.33
USP35-206ENST00000530535 RSPH14Q9UHP6 348 aa17.11■□□□□ 0.33
USP35-206ENST00000530535 MARSP56192 900 aaKnown RBP17.1■□□□□ 0.33
USP35-206ENST00000530535 ZNF543Q08ER8 600 aa17.1■□□□□ 0.33
USP35-206ENST00000530535 FAM26FQ5R3K3 315 aa17.1■□□□□ 0.33
USP35-206ENST00000530535 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
USP35-206ENST00000530535 MS4A14Q96JA4 679 aa17.1■□□□□ 0.33
USP35-206ENST00000530535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■□□□□ 11.1
USP35-206ENST00000530535 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
USP35-206ENST00000530535 RNF181Q9P0P0 153 aa17.1■□□□□ 0.33
USP35-206ENST00000530535 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 SERPING1P05155 500 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 APBA1Q02410 837 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 CCDC181Q5TID7 509 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 TANGO6Q9C0B7 1094 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 PANK4Q9NVE7 773 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 GREB1LQ9C091 1923 aaPredicted RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 GRIN2DO15399 1336 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 TRAF5O00463 557 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 EPB41P11171 864 aaKnown RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 PAFAH1B1P43034 410 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 CORO7P57737 925 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 TNFAIP1Q13829 316 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 TDRD12Q587J7 1177 aaKnown RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 SFMBT2Q5VUG0 894 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 ADGRF4Q8IZF3 695 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 LSM14BQ9BX40 385 aaKnown RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 NUCKS1Q9H1E3 243 aaKnown RBP17.09■□□□□ 0.33
USP35-206ENST00000530535 GPRC5DQ9NZD1 345 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 PGAP2Q9UHJ9 254 aa17.09■□□□□ 0.33
USP35-206ENST00000530535 IRAK1P51617 712 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 RASA3Q14644 834 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 NAB2Q15742 525 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 ABCB5Q2M3G0 1257 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 CCDC40Q4G0X9 1142 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 GLE1Q53GS7 698 aaKnown RBP17.08■□□□□ 0.33
USP35-206ENST00000530535 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 C8orf74Q6P047 294 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 GDF3Q9NR23 364 aa17.08■□□□□ 0.33
USP35-206ENST00000530535 GOLGA8KD6RF30 607 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 TBC1D12O60347 775 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 PALMO75781 387 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 GDF11O95390 407 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 POLR2FP61218 127 aaKnown RBP17.08■□□□□ 0.32
USP35-206ENST00000530535 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 TTMPQ5BVD1 217 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 CDAN1Q8IWY9 1227 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 RNF14Q9UBS8 474 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
USP35-206ENST00000530535 SCAF8Q9UPN6 1271 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms