RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 LIPIQ6XZB0 460 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 AMIGO3Q86WK7 504 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 RAVER1Q8IY67 606 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 PANK1Q8TE04 598 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 ASB15Q8WXK1 588 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 FOXRED1Q96CU9 486 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 C16orf92Q96LL3 132 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 ASPSCR1Q9BZE9 553 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 HOMER2Q9NSB8 354 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 SLC5A4Q9NY91 659 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 DTLQ9NZJ0 730 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 BRINP1O60477 761 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 ZBTB7AO95365 584 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 PDGFRBP09619 1106 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 JUNBP17275 347 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 IRAK1P51617 712 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 SLC9A5Q14940 896 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 TERF2Q15554 542 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 MLANAQ16655 118 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 PHF19Q5T6S3 580 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 CD276Q5ZPR3 534 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 CC2D1AQ6P1N0 951 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 MPZL3Q6UWV2 235 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 RTN4RL1Q86UN2 441 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 STK32CQ86UX6 486 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 LDHDQ86WU2 507 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 SPATS2Q86XZ4 545 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 IGDCC3Q8IVU1 814 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 NLGN4XQ8N0W4 816 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 CBARPQ8N350 705 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 SLC5A5Q92911 643 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 APOBEC2Q9Y235 224 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 THRAP3Q9Y2W1 955 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-222ENST00000520400 PRAMEF25A6NGN4 478 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 MAFKO60675 156 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 APPP05067 770 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 IGFBP6P24592 240 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 SDHAP31040 664 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 ERVK-21P61565 698 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 PDCD1Q15116 288 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 RNF219Q5W0B1 726 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 CNTD1Q8N815 330 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 RTF1Q92541 710 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 ZNF496Q96IT1 587 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 NOX5Q96PH1 765 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 SLC39A2Q9NP94 309 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 TOPORSQ9NS56 1045 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
CTNNA1-222ENST00000520400 HRKO00198 91 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 GABRDO14764 452 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 FOXP2O15409 715 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 AOAHP28039 575 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 DBPQ10586 325 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 DDB1Q16531 1140 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 TMC5Q6UXY8 1006 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 ETV3LQ6ZN32 361 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 HDGFL2Q7Z4V5 671 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 TRIM48Q8IWZ4 208 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 GBP4Q96PP9 640 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 AMNQ9BXJ7 453 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 PRDM12Q9H4Q4 367 aa6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 DCP1AQ9NPI6 582 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-222ENST00000520400 HIP1RO75146 1068 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 KRT1P04264 644 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 GJA4P35212 333 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 PHC1P78364 1004 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 CACNB2Q08289 660 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 INAVAQ3KP66 663 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 CD300LDQ6UXZ3 194 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 NECAB2Q7Z6G3 386 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 FERMT3Q86UX7 667 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 CILP2Q8IUL8 1156 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 ERCC4Q92889 916 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 EPB41L4BQ9H329 900 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 PCIF1Q9H4Z3 704 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 EPB41L4AQ9HCS5 686 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 HSPBP1Q9NZL4 362 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 TRHDEQ9UKU6 1024 aa6.31□□□□□ -1.4
CTNNA1-222ENST00000520400 LRRC10BA6NIK2 292 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 GOLGA6L22H0YM25 854 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 ELL2O00472 640 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 NFIBO00712 420 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 ABLIM1O14639 778 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 PEX10O60683 326 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 IL18BPO95998 194 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 LIMS1P48059 325 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 MESP2Q0VG99 397 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 ADAM9Q13443 819 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 ZNF174Q15697 407 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 TMEFF1Q8IYR6 380 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 SMARCC2Q8TAQ2 1214 aa6.3□□□□□ -1.4
CTNNA1-222ENST00000520400 CPA5Q8WXQ8 436 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms