RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SAMD3Q8N6K7 520 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 AFAP1L1Q8TED9 768 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 BLOC1S4Q9NUP1 217 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 RABGAP1Q9Y3P9 1069 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 SAR1BQ9Y6B6 198 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 BICDL2A1A5D9 508 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 PPFIA4O75335 1185 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 VCAM1P19320 739 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 STX17P56962 302 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 SNAP25P60880 206 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 ASIC1P78348 528 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 UNC13DQ70J99 1090 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 LDHDQ86WU2 507 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 SMYD4Q8IYR2 804 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 ACRBPQ8NEB7 543 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 ERMNQ8TAM6 284 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 LRRC15Q8TF66 581 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 CCDC102AQ96A19 550 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 PLIN2Q99541 437 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 FAN1Q9Y2M0 1017 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 GCOM1H8Y6P7 765 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 OPLAHO14841 1288 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 POLR2MP0CAP2 368 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 FDX1P10109 184 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 TNNT3P45378 269 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 DGKZQ13574 1117 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 TTLL12Q14166 644 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 PTPN21Q16825 1174 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 SH3D19Q5HYK7 790 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 HAUS3Q68CZ6 603 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 FOXR2Q6PJQ5 311 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 GBP6Q6ZN66 633 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 MOB2Q70IA6 237 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 ZNF572Q7Z3I7 529 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 MB21D1Q8N884 522 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 PRPF38AQ8NAV1 312 aaKnown RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 FBXO28Q9NVF7 368 aa20.21■□□□□ 0.83
SDC2-202ENST00000518385 MAGEC2Q9UBF1 373 aaPredicted RBP20.21■□□□□ 0.83
SDC2-202ENST00000518385 A0A1W2PQJ5 194 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 POTEMA6NI47 508 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 EIF3CLB5ME19 914 aaKnown RBP20.2■□□□□ 0.82
SDC2-202ENST00000518385 PRLRP16471 622 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 PDE4DQ08499 809 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 ETNPPLQ8TBG4 499 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 EIF3CQ99613 913 aaKnown RBP20.2■□□□□ 0.82
SDC2-202ENST00000518385 SLF1Q9BQI6 1058 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 ZSWIM4Q9H7M6 989 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 GDAQ9Y2T3 454 aa20.2■□□□□ 0.82
SDC2-202ENST00000518385 OTOFQ9HC10 1997 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 TRAF5O00463 557 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 RHOXF2BP0C7M4 288 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 HMGCS2P54868 508 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 UBXN1Q04323 297 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 PPATQ06203 517 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 LDLRAD1Q5T700 205 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 COG1Q8WTW3 980 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 RHOXF2Q9BQY4 288 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 RPAP3Q9H6T3 665 aaPredicted RBP20.19■□□□□ 0.82
SDC2-202ENST00000518385 NMRK2Q9NPI5 230 aa20.19■□□□□ 0.82
SDC2-202ENST00000518385 MAP3K20Q9NYL2 800 aaKnown RBP20.19■□□□□ 0.82
SDC2-202ENST00000518385 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 ICAM1P05362 532 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 CCNE1P24864 410 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 CCT6AP40227 531 aaKnown RBP20.18■□□□□ 0.82
SDC2-202ENST00000518385 ERO1BQ86YB8 467 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 CCDC155Q8N6L0 562 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 ZNF507Q8TCN5 953 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 CLMNQ96JQ2 1002 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 ELP3Q9H9T3 547 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 TMOD4Q9NZQ9 345 aa20.18■□□□□ 0.82
SDC2-202ENST00000518385 SHOX2O60902 331 aaPredicted RBP20.17■□□□□ 0.82
SDC2-202ENST00000518385 CPP00450 1065 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 PRR16Q569H4 304 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 P2RX7Q99572 595 aaKnown RBP20.17■□□□□ 0.82
SDC2-202ENST00000518385 CRACR2AQ9BSW2 395 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 TAB2Q9NYJ8 693 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 MYMKA6NI61 221 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 SPDYE5A6NIY4 337 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 ZNF76P36508 570 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 CORO7P57737 925 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 ZBED6P86452 979 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 GHRHRQ02643 423 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 CNKSR2Q8WXI2 1034 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 P2RX5Q93086 422 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 LENG9Q96B70 501 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 PURBQ96QR8 312 aaKnown RBP20.17■□□□□ 0.82
SDC2-202ENST00000518385 VPS16Q9H269 839 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 HPCAL4Q9UM19 191 aa20.17■□□□□ 0.82
SDC2-202ENST00000518385 CXCL11O14625 94 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 RNF40O75150 1001 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 FLOT1O75955 427 aa20.16■□□□□ 0.82
SDC2-202ENST00000518385 PRPF6O94906 941 aaKnown RBP20.16■□□□□ 0.82
SDC2-202ENST00000518385 TTI2Q6NXR4 508 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms