RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 UMODL1Q5DID0 1318 aa12.6□□□□□ -0.39
UBE2D3-232ENST00000514755 RANBP2P49792 3224 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 KIAA0355O15063 1070 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 EDIL3O43854 480 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 DEXIO95424 95 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 KCNA2P16389 499 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 BRDTQ58F21 947 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 PPTC7Q8NI37 304 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 PPP1R12CQ9BZL4 782 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 MLXIPQ9HAP2 919 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
UBE2D3-232ENST00000514755 ARP10275 920 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 FDPSP14324 419 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 BMP8BP34820 402 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 SREBF1P36956 1147 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 EPHB4P54760 987 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 SP4Q02446 784 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 AP3B2Q13367 1082 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 MTMR1Q13613 665 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 ANKRD1Q15327 319 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 NPY5RQ15761 445 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 DGKDQ16760 1214 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 RETREG3Q86VR2 466 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 CRYGNQ8WXF5 182 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 GTF3C6Q969F1 213 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 GPRASP2Q96D09 838 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 MXRA8Q9BRK3 442 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 C16orf70Q9BSU1 422 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
UBE2D3-232ENST00000514755 TRIOBPQ9H2D6 2365 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 FAM86B1E9PN63 330 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 HAS3O00219 553 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 JAK2O60674 1132 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 KPNA6O60684 536 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 F2P00734 622 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 FAM86B2P0C5J1 330 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 CYP2C9P11712 490 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 RAG1P15918 1043 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 GNA11P29992 359 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 RFC5P40937 340 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 NLRP5P59047 1200 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 NEDD9Q14511 834 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 CPLX2Q6PUV4 134 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 TRIM50Q86XT4 487 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 REXO1Q8N1G1 1221 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 CTAGE1Q96RT6 745 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 GPR20Q99678 358 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 LBHD1Q9BQE6 289 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 SH3GLB2Q9NR46 395 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 KCNH7Q9NS40 1196 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
UBE2D3-232ENST00000514755 M0R2N6 131 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 SOX1O00570 391 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 TIMP1P01033 207 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 LGALS2P05162 132 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 CYP2C18P33260 490 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 FXR1P51114 621 aaKnown RBP eCLIP12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 KIAA0753Q2KHM9 967 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 CEP55Q53EZ4 464 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 NFRKBQ6P4R8 1299 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 NSUN7Q8NE18 718 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 HDAC6Q9UBN7 1215 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
UBE2D3-232ENST00000514755 LAMA3Q16787 3333 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 IGLV3-22A0A075B6J6 115 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 GSTTP1A0A1W2PQM5 241 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 MEIS1O00470 390 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 CDKL5O76039 1030 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 CYP3A4P08684 503 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 CCL23P55773 120 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms