RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 UTRNP46939 3433 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 MANSC4A6NHS7 340 aaPredicted RBP10.21□□□□□ -0.77
NR1I3-230ENST00000511944 FAM86B1E9PN63 330 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 FAM86B2P0C5J1 330 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 CCND2P30279 289 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 TXKP42681 527 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 SARSP49591 514 aaKnown RBP10.21□□□□□ -0.77
NR1I3-230ENST00000511944 CCNA1P78396 465 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 AGERQ15109 404 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 PGM5Q15124 567 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 CAMK4Q16566 473 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 PRR16Q569H4 304 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 RRAGBQ5VZM2 374 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 USP49Q70CQ1 688 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 MOB2Q70IA6 237 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 BPHLQ86WA6 291 aaPredicted RBP10.21□□□□□ -0.77
NR1I3-230ENST00000511944 GAS2L3Q86XJ1 694 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 ABRAQ8N0Z2 381 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 RDM1Q8NG50 284 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 RMDN3Q96TC7 470 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 C1QTNF2Q9BXJ5 285 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 TBC1D22BQ9NU19 505 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 RMND1Q9NWS8 449 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 MORF4L1Q9UBU8 362 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
NR1I3-230ENST00000511944 DACH1Q9UI36 760 aa10.21□□□□□ -0.77
NR1I3-230ENST00000511944 MYH7BA7E2Y1 1941 aa10.21□□□□□ -0.78
NR1I3-230ENST00000511944 SRCAPQ6ZRS2 3230 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 A0A087X0B3 334 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 MSH4O15457 936 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 PSMD10O75832 226 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 RPA1P27694 616 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 PPP1R2P41236 205 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 TECP42680 631 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 TMEM119Q4V9L6 283 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 CST9Q5W186 159 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 B3GNT9Q6UX72 402 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 SLC30A10Q6XR72 485 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 NLRX1Q86UT6 975 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 VSIG10LQ86VR7 867 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 PLA2G4DQ86XP0 818 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 CKAP2LQ8IYA6 745 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 MLKLQ8NB16 471 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 SMC1BQ8NDV3 1235 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 TBC1D5Q92609 795 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 SMARCE1Q969G3 411 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 DHX58Q96C10 678 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 CDK5RAP3Q96JB5 506 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 INPP4AQ96PE3 977 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-230ENST00000511944 PARK7Q99497 189 aaKnown RBP10.2□□□□□ -0.78
NR1I3-230ENST00000511944 ARHGAP9Q9BRR9 750 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 MMTAG2Q9BU76 263 aaKnown RBP10.2□□□□□ -0.78
NR1I3-230ENST00000511944 POLR3CQ9BUI4 534 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-230ENST00000511944 ZNF408Q9H9D4 720 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 TUFT1Q9NNX1 390 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 A1CFQ9NQ94 594 aaKnown RBP10.2□□□□□ -0.78
NR1I3-230ENST00000511944 JADE2Q9NQC1 790 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 BTBD7Q9P203 1132 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 SERTAD1Q9UHV2 236 aa10.2□□□□□ -0.78
NR1I3-230ENST00000511944 CCL15-CCL14A0A0B4J2E2 113 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 CNMDO75829 334 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PLCG1P19174 1290 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 EDNRBP24530 442 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 HUNKP57058 714 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 NLRP12P59046 1061 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 ERVK-24P63145 666 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PRR20EP86478 221 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PRR20CP86479 221 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PRR20DP86480 221 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PRR20BP86481 221 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PRR20AP86496 221 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PTK2Q05397 1052 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 DPYDQ12882 1025 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
NR1I3-230ENST00000511944 KCNB1Q14721 858 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 CCL15Q16663 113 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 GNPTABQ3T906 1256 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 NAALADL2Q58DX5 795 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 SPECC1Q5M775 1068 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 ARHGEF16Q5VV41 709 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 NSMFQ6X4W1 530 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PDILTQ8N807 584 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 RASSF8Q8NHQ8 419 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 SNX29Q8TEQ0 813 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 BRI3BPQ8WY22 251 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 ANP32BQ92688 251 aaKnown RBP10.19□□□□□ -0.78
NR1I3-230ENST00000511944 CCDC47Q96A33 483 aaKnown RBP10.19□□□□□ -0.78
NR1I3-230ENST00000511944 PAGE5Q96GU1 130 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 TEKT3Q9BXF9 490 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 MOV10L1Q9BXT6 1211 aaKnown RBP10.19□□□□□ -0.78
NR1I3-230ENST00000511944 HOMER2Q9NSB8 354 aa10.19□□□□□ -0.78
NR1I3-230ENST00000511944 TOR4AQ9NXH8 423 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms