RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SPDYE3A6NKU9 549 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 LRRIQ3A6PVS8 624 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 RNF40O75150 1001 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SSBP05455 408 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SPDYE6P0CI01 402 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SNHG28P0DPA3 235 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 AMPD3Q01432 767 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 ZNF543Q08ER8 600 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 LAMB3Q13751 1172 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 RASA3Q14644 834 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CASP8Q14790 479 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SPDYE2Q495Y8 402 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SH3D19Q5HYK7 790 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CDC42EP5Q6NZY7 148 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 SV2BQ7L1I2 683 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 FAM228AQ86W67 206 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 KIAA0825Q8IV33 1275 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 MAB21L3Q8N8X9 362 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 FAM71BQ8TC56 605 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 DDX12PQ92771 950 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 TMX4Q9H1E5 349 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-208ENST00000503004 CUEDC2Q9H467 287 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 DNAJC18Q9H819 358 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 KANSL2Q9H9L4 492 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 TBC1D7Q9P0N9 293 aa5.67□□□□□ -1.5
CLDND1-208ENST00000503004 IGKV6D-41A0A0C4DH26 115 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ESYT2A0FGR8 921 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MACROD2A1Z1Q3 448 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 PPP1R12BO60237 982 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 FSBPO95073 299 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ATP1A1P05023 1023 aaKnown RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 TAL1P17542 331 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SNAP25P60880 206 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 VSNL1P62760 191 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ASPRV1Q53RT3 343 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 APOBEC3HQ6NTF7 200 aaKnown RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CNNM4Q6P4Q7 775 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 TRIM42Q8IWZ5 723 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ARL10Q8N8L6 244 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 HAS1Q92839 578 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC47Q96A33 483 aaKnown RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CAPZA3Q96KX2 299 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CRAMP1Q96RY5 1269 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 EPAS1Q99814 870 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 COA1Q9GZY4 146 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 NHEJ1Q9H9Q4 299 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ATP6V0A2Q9Y487 856 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 PNMA6FA0A0J9YX94 578 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 BICDL2A1A5D9 508 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 G3V3G9 751 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 EBAG9O00559 213 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ZNF263O14978 683 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 RPSAP08865 295 aaKnown RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SMARCA1P28370 1054 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 AMPD2Q01433 879 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 TMEM62Q0P6H9 643 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 TMEM266Q2M3C6 531 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 KRT79Q5XKE5 535 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CENPPQ6IPU0 288 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SP8Q8IXZ3 490 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CEP112Q8N8E3 955 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 AFAP1L1Q8TED9 768 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 FGFBP2Q9BYJ0 223 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MMRN2Q9H8L6 949 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 PSTPIP2Q9H939 334 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MAGEF1Q9HAY2 307 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 KLC4Q9NSK0 619 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 PPP1R1BQ9UD71 204 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SUN2Q9UH99 717 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 DDX25Q9UHL0 483 aaKnown RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MYO6Q9UM54 1294 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 L1RE1Q9UN81 338 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 GNEQ9Y223 722 aaKnown RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 UBR3Q6ZT12 1888 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SPATA31A6Q5VVP1 1343 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 KLRG2A4D1S0 409 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CTAGE15A4D2H0 777 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 DDTLA6NHG4 134 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 E9PMD0 336 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ZBTB5O15062 677 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ZNF185O15231 689 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 RASSF9O75901 435 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CTAGE8P0CG41 777 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 FXR2P51116 673 aaKnown RBP eCLIP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SCNN1BP51168 640 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 SLC8A3P57103 927 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC15Q0P6D6 951 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MYBPC2Q14324 1141 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 BRD3Q15059 726 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MEA1Q16626 185 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CEP85LQ5SZL2 805 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC181Q5TID7 509 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 MSL1Q68DK7 614 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 UNC13DQ70J99 1090 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 KIAA1328Q86T90 577 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 C2CD5Q86YS7 1000 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms