RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PASD1Q8IV76 773 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 TMEFF1Q8IYR6 380 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 NXPE1Q8N323 547 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 KYQ8NBH2 561 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 HIPK4Q8NE63 616 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 WDR48Q8TAF3 677 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 WRNIP1Q96S55 665 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 ORAI3Q9BRQ5 295 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 THG1LQ9NWX6 298 aaKnown RBP6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 HSPBP1Q9NZL4 362 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 B3GALT1Q9Y5Z6 326 aa6.87□□□□□ -1.31
HMGB1P38-201ENST00000490557 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 LOC105371045A0A1W2PR82 267 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 ZNF891A8MT65 544 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 FOXP2O15409 715 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 CYP7B1O75881 506 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 FBXO21O94952 628 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 C4BPAP04003 597 aaKnown RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 AFF3P51826 1226 aaKnown RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 KPNA1P52294 538 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 ITGA1P56199 1179 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 HERVK_113P62684 666 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 DBPQ10586 325 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 SEPT7Q16181 437 aaKnown RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 ZNF662Q6ZS27 426 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 KIAA1958Q8N8K9 716 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 ZSWIM3Q96MP5 696 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 IRF2BPLQ9H1B7 796 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 ACSS2Q9NR19 701 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 DLL4Q9NR61 685 aa6.86□□□□□ -1.31
HMGB1P38-201ENST00000490557 FAM83GA6ND36 823 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 ZBTB48P10074 688 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 PFKPQ01813 784 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 STRN3Q13033 797 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 DHCR24Q15392 516 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 FSTL4Q6MZW2 842 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 CC2D1AQ6P1N0 951 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 RNF180Q86T96 592 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 ZSCAN18Q8TBC5 510 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 FNIP1Q8TF40 1166 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 DLG3Q92796 817 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 ERCC4Q92889 916 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 NOX5Q96PH1 765 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 TTC1Q99614 292 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 SLC39A2Q9NP94 309 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 ARHGAP20Q9P2F6 1191 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 RBPJLQ9UBG7 517 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 CROTQ9UKG9 612 aa6.85□□□□□ -1.31
HMGB1P38-201ENST00000490557 ANKRD62A6NC57 917 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 CYP17A1P05093 508 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 MMEP08473 750 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 ATP2A2P16615 1042 aaKnown RBP6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 GLRBP48167 497 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 DSG1Q02413 1049 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 SEC23AQ15436 765 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 SKIDA1Q1XH10 827 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 PRAMEF18Q5VWM3 479 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 LIPIQ6XZB0 460 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 KRT26Q7Z3Y9 468 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 IGDCC4Q8TDY8 1250 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 CHTF18Q8WVB6 975 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 SCYL1Q96KG9 808 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 GBP4Q96PP9 640 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 SYT3Q9BQG1 590 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
HMGB1P38-201ENST00000490557 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 ZNF839A8K0R7 811 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 SLC9A1P19634 815 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 PTGS1P23219 599 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 SDHAP31040 664 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 NFKB2Q00653 900 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 LRRC56Q8IYG6 542 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 EFHBQ8N7U6 833 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 SMC1BQ8NDV3 1235 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 ASB15Q8WXK1 588 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 E2F7Q96AV8 911 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 EPB41L4AQ9HCS5 686 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 NTMQ9P121 344 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 SPO11Q9Y5K1 396 aa6.83□□□□□ -1.32
HMGB1P38-201ENST00000490557 PRAMEF22A3QJZ6 481 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 FKBP9O95302 570 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 VIL1P09327 827 aaKnown RBP6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 IBSPP21815 317 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 AOAHP28039 575 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 LSSP48449 732 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 ADAM9Q13443 819 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 NME9Q86XW9 330 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 ZZZ3Q8IYH5 903 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 DTX3Q8N9I9 347 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 ATL2Q8NHH9 583 aa6.82□□□□□ -1.32
HMGB1P38-201ENST00000490557 ZCRB1Q8TBF4 217 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 647.8 ms