RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ACER1Q8TDN7 264 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 IWS1Q96ST2 819 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 TRIM9Q9C026 710 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
SMPD4-218ENST00000482171 THAP9Q9H5L6 903 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
SMPD4-218ENST00000482171 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 MARK3P27448 753 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 ECE1P42892 770 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 PEX3P56589 373 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 EHHADHQ08426 723 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 E2F5Q15329 346 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 DAAM2Q86T65 1068 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 PRPF38AQ8NAV1 312 aaKnown RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 TRIM58Q8NG06 486 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 PRR12Q9ULL5 1215 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 STK4Q13043 487 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 MTMR1Q13613 665 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 PPP1R7Q15435 360 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 ATP6V0A1Q93050 837 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 TACO1Q9BSH4 297 aaKnown RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 TRIM6Q9C030 488 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 FAM205AQ6ZU69 1335 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 NDUFA10O95299 355 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 AFPP02771 609 aaKnown RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 PKN1Q16512 942 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 MMS22LQ6ZRQ5 1243 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 RNF181Q9P0P0 153 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 ADAMTS1Q9UHI8 967 aa12.32□□□□□ -0.44
SMPD4-218ENST00000482171 XRN1Q8IZH2 1706 aaKnown RBP12.32□□□□□ -0.44
SMPD4-218ENST00000482171 RPSAP08865 295 aaKnown RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 H2AFZP0C0S5 128 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 C2orf54Q08AI8 447 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 MTMR2Q13614 643 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 SEL1L2Q5TEA6 688 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 H2AFVQ71UI9 128 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 LRRC45Q96CN5 670 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 DNAI2Q9GZS0 605 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 KMT5AQ9NQR1 393 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 GCNT4Q9P109 453 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 TUBE1Q9UJT0 475 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 ACTN4O43707 911 aaKnown RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 GFPT2O94808 682 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 ZBED6P86452 979 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 GUCY2DQ02846 1103 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 PDXDC2PQ6P474 469 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 CACNA1FO60840 1977 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 SRGAP2O75044 1071 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 RASAL2Q9UJF2 1139 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 GAP43P17677 238 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 PEX19P40855 299 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 KCNJ6P48051 423 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 MYL7Q01449 175 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 ZNF668Q96K58 619 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-218ENST00000482171 PANX2Q96RD6 677 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
SMPD4-218ENST00000482171 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 INO80B-WBP1J3KQ70 363 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 CTNNA1P35221 906 aaKnown RBP12.3□□□□□ -0.44
SMPD4-218ENST00000482171 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
SMPD4-218ENST00000482171 SLC7A5Q01650 507 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 LRRC63Q05C16 580 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 ANKRD40Q6AI12 368 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 INO80BQ9C086 356 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-218ENST00000482171 FEM1BQ9UK73 627 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 HYOU1Q9Y4L1 999 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 ENTPD3O75355 529 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 OSTNP61366 133 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 DPYDQ12882 1025 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 DCUN1D2Q6PH85 259 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 IQCDQ96DY2 449 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms