RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 JMJD4Q9H9V9 463 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CERS4Q9HA82 394 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ZCCHC17Q9NP64 241 aaKnown RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 BRD7Q9NPI1 651 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 WASH6PQ9NQA3 447 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 STARD7Q9NQZ5 370 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF277Q9NRM2 450 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TOMM22Q9NS69 142 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 SPTLC3Q9NUV7 552 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 IRAK4Q9NWZ3 460 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 EPS15L1Q9UBC2 864 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 SEL1LQ9UBV2 794 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ADAM30Q9UKF2 790 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 L1RE1Q9UN81 338 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 MAGED2Q9UNF1 606 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 JAG2Q9Y219 1238 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 AXIN2Q9Y2T1 843 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RRP7AQ9Y3A4 280 aaKnown RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ABCA10Q8WWZ4 1543 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ROBO1Q9Y6N7 1651 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CEP290O15078 2479 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC168Q8NDH2 2452 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CUL7Q14999 1698 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 AKNAQ7Z591 1439 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 SYNRGQ9UMZ2 1314 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 A0A087WV62 115 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 FAM86C2PA6NEL3 165 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GOLGA8AA7E2F4 631 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GOLGA8BA8MQT2 603 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 RHPN2P1A8MT19 583 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF891A8MT65 544 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 METTL12A8MUP2 240 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 SPATA31C2B4DYI2 1134 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 B4E171 279 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 EYA2O00167 538 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CPLX1O14810 134 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 PCDHGA12O60330 932 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DLX3O60479 287 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DKC1O60832 514 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GABBR2O75899 941 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CD2BP2O95400 341 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 B3GALT4O96024 378 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CSTBP04080 98 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 C8BP07358 591 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 HOXD8P13378 290 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 MX2P20592 715 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 TARSP26639 723 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GRNP28799 593 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KIF5BP33176 963 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GALNSP34059 522 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 IL6STP40189 918 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 STAT1P42224 750 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GRIA2P42262 883 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 RNF144AP50876 292 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 YARSP54577 528 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KCNQ4P56696 695 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GUCY1A3Q02108 690 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 NHLH1Q02575 133 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GRM1Q13255 1194 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF267Q14586 743 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ARHGAP44Q17R89 818 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ANO4Q32M45 955 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ANKRD39Q53RE8 183 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CC2D1BQ5T0F9 858 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 HECTD3Q5T447 861 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CPLX2Q6PUV4 134 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC129Q6ZRS4 1044 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 TTLL7Q6ZT98 887 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 Q6ZVU0 165 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GPR155Q7Z3F1 870 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DAAM2Q86T65 1068 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DENND1CQ8IV53 801 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 GRAMD1CQ8IYS0 662 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KIAA0319LQ8IZA0 1049 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 OTUD6BQ8N6M0 293 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KDF1Q8NAX2 398 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF527Q8NB42 609 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CLRN3Q8NCR9 226 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 MSANTD4Q8NCY6 345 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DIS3LQ8TF46 1054 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DCAF4Q8WV16 495 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CENPIQ92674 756 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ATP2A3Q93084 1043 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 WNT2BQ93097 391 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 HVCN1Q96D96 273 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 TMEM41AQ96HV5 264 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ZC3H10Q96K80 434 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 TEKT5Q96M29 485 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 IWS1Q96ST2 819 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 BAG1Q99933 345 aaPredicted RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 ZFYVE21Q9BQ24 234 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KCNH6Q9H252 994 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 CXorf56Q9H5V9 222 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 DBNDD1Q9H9R9 158 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 IL21Q9HBE4 155 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 VTA1Q9NP79 307 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 UBN1Q9NPG3 1134 aa3.31□□□□□ -1.88
HMGN4-202ENST00000477243 THG1LQ9NWX6 298 aaKnown RBP3.31□□□□□ -1.88
HMGN4-202ENST00000477243 KCNK4Q9NYG8 393 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms