RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SYNCQ9H7C4 482 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ARFGAP3Q9NP61 516 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 ORC3Q9UBD5 711 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 HCN2Q9UL51 889 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 MAFFQ9ULX9 164 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 CARD8Q9Y2G2 431 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 DIS3Q9Y2L1 958 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 DAAM1Q9Y4D1 1078 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 PCDHGC4Q9Y5F7 938 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 PTCH2Q9Y6C5 1203 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 FAM169AQ9Y6X4 670 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 AATKQ6ZMQ8 1374 aa6.63□□□□□ -1.35
ECHDC1-215ENST00000475319 P4HA2O15460 535 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 TMCC1O94876 653 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 ASMTLO95671 621 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 BPNT1O95861 308 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 MAPTP10636 758 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CCT6AP40227 531 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 AMPHP49418 695 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CLK1P49759 484 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 ZNF131P52739 623 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 ATP11AP98196 1134 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 TNP2Q05952 138 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 PPP2R3AQ06190 1150 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 DRP2Q13474 957 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 MAP7Q14244 749 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 THEMIS2Q5TEJ8 643 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 AGAP9Q5VTM2 703 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CREB3L3Q68CJ9 461 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CC2D1AQ6P1N0 951 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 GGT6Q6P531 493 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 FIGNL1Q6PIW4 674 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 B4GALNT4Q76KP1 1039 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 WAPLQ7Z5K2 1190 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 YTHDF3Q7Z739 585 aaKnown RBP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 PCGF5Q86SE9 256 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 DRC7Q8IY82 874 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC144CPQ8IYA2 1237 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 SAMD14Q8IZD0 417 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 TTC39CQ8N584 583 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 WDR66Q8TBY9 1149 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 STK35Q8TDR2 534 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CENPTQ96BT3 561 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 KLC4Q9NSK0 619 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 ACAD8Q9UKU7 415 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 CYP8B1Q9UNU6 501 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 ZNF148Q9UQR1 794 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 PRELID1Q9Y255 219 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 SSX2IPQ9Y2D8 614 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 SAMM50Q9Y512 469 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 SCINQ9Y6U3 715 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 ANKRD30AQ9BXX3 1397 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 FYCO1Q9BQS8 1478 aa6.62□□□□□ -1.35
ECHDC1-215ENST00000475319 EFCAB8A8MWE9 144 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 B4DLN1 442 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 J3QW42 95 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 ZSCAN12O43309 604 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 MGEA5O60502 916 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 TOM1O60784 492 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 NME2P22392 152 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 IL4RP24394 825 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 FNTAP49354 379 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SCNN1BP51168 640 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 INHBCP55103 352 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CTAG1AP78358 180 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 MLLT1Q03111 559 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SSRP1Q08945 709 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 ZBTB17Q13105 803 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 DHX8Q14562 1220 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 TCEA2Q15560 299 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 C21orf62-AS1Q17RA5 79 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 BOLA3Q53S33 107 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 DALRD3Q5D0E6 543 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SH2D4BQ5SQS7 431 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 C6orf15Q6UXA7 325 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 NCCRP1Q6ZVX7 275 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 NEK10Q6ZWH5 1172 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CHSY3Q70JA7 882 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 NANOGNBQ7Z5D8 188 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 LUZP1Q86V48 1076 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 HOOK3Q86VS8 718 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SLC7A5P1Q8MH63 180 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 GRIN3AQ8TCU5 1115 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 ACMSDQ8TDX5 336 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 JDP2Q8WYK2 163 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 GOLGA1Q92805 767 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 GAL3ST3Q96A11 431 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SPAG5Q96R06 1193 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 PBX4Q9BYU1 374 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 TNMDQ9H2S6 317 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CLEC4MQ9H2X3 399 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 EHMT1Q9H9B1 1298 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CD248Q9HCU0 757 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SLC39A2Q9NP94 309 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 HELLSQ9NRZ9 838 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 ATXN10Q9UBB4 475 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms