RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MYH7BA7E2Y1 1941 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 SRRM3A6NNA2 597 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 SSR1P43307 286 aaKnown RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 TCP10Q12799 353 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 TMEM266Q2M3C6 531 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 SLC27A3Q5K4L6 730 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 APOBEC3HQ6NTF7 200 aaKnown RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 ZBTB10Q96DT7 871 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 RIC8AQ9NPQ8 531 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 BATF3Q9NR55 127 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 TRPC5Q9UL62 973 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 MYH4Q9Y623 1939 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 E7EVH7 732 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 hCG_1984214I3L0E3 225 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 EPHB6O15197 1021 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 SCTRP47872 440 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 IFFO1Q0D2I5 559 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 TSR1Q2NL82 804 aaKnown RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 ZC3H12AQ5D1E8 599 aaKnown RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 ZNF662Q6ZS27 426 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 ZNF572Q7Z3I7 529 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 ZNF713Q8N859 430 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 PIK3R5Q8WYR1 880 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 RAD54LQ92698 747 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 HAS1Q92839 578 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 RSRC1Q96IZ7 334 aaKnown RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 LACRTQ9GZZ8 138 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 DNAJC18Q9H819 358 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 EBF2Q9HAK2 575 aa14.25□□□□□ -0.13
CCNL1-216ENST00000475298 DDX25Q9UHL0 483 aaKnown RBP14.25□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L15C9J2P7 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L13C9JLJ4 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L11C9JVI0 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L18D6R9N7 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L22D6RA61 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L17D6RBQ6 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L19D6RCP7 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L20D6RJB6 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 SNUPNO95149 360 aaKnown RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 PLEKP08567 350 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 CYP27A1Q02318 531 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L24Q0WX57 530 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 BYSLQ13895 437 aaKnown RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 MEA1Q16626 185 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 USP17L6PQ6QN14 398 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 UNC13DQ70J99 1090 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 BZW1Q7L1Q6 419 aaKnown RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 NSMCE1Q8WV22 266 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 DDX12PQ92771 950 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 STAMBPL1Q96FJ0 436 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 DUSP10Q9Y6W6 482 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 G3V3G9 751 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 ATP6V1G2O95670 118 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 CLK2P49760 499 aaKnown RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 ITGB3BPQ13352 177 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 ORC2Q13416 577 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 QPCTQ16769 361 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 KRT79Q5XKE5 535 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 IQCEQ6IPM2 695 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 FAM114A1Q8IWE2 563 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 SAAL1Q96ER3 474 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 THOC1Q96FV9 657 aaKnown RBP14.24□□□□□ -0.13
CCNL1-216ENST00000475298 STK17AQ9UEE5 414 aa14.24□□□□□ -0.13
CCNL1-216ENST00000475298 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 ZBTB5O15062 677 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 SNAP25P60880 206 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 SNX1Q13596 522 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 LACTB2Q53H82 288 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 HAUS3Q68CZ6 603 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 CCDC70Q6NSX1 233 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 KIAA0825Q8IV33 1275 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 CUL5Q93034 780 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 TEKT1Q969V4 418 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 NUP58Q9BVL2 599 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 QTRT2Q9H974 415 aaKnown RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 NOD2Q9HC29 1040 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 FAM207AQ9NSI2 230 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 SWAP70Q9UH65 585 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 PECAM1P16284 738 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 TNFRSF8P28908 595 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 PDE6BP35913 854 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 ELF3P78545 371 aaPredicted RBP14.23□□□□□ -0.13
CCNL1-216ENST00000475298 ZBED6P86452 979 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 ITIH3Q06033 890 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 TMEM119Q4V9L6 283 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 MIS18BP1Q6P0N0 1132 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 KRT26Q7Z3Y9 468 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 CCDC155Q8N6L0 562 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 SPATA4Q8NEY3 305 aa14.23□□□□□ -0.13
CCNL1-216ENST00000475298 TBC1D31Q96DN5 1066 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms