RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 CHRNA4P43681 627 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 ZNF165P49910 485 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 ZNF75DP51815 510 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 GPSM2P81274 684 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 OS9Q13438 667 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-214ENST00000473177 NBPF9Q3BBW0 867 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 ZC3H12AQ5D1E8 599 aaKnown RBP5.6□□□□□ -1.51
LRCH3-214ENST00000473177 SLC10A5Q5PT55 438 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 XP32Q5T750 250 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 BLOC1S2Q6QNY1 142 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CCDC73Q6ZRK6 1079 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 RBM43Q6ZSC3 357 aaKnown RBP5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CCDC186Q7Z3E2 898 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CD163Q86VB7 1156 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 TXNRD3Q86VQ6 643 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CEP57L1Q8IYX8 460 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 SSH3Q8TE77 659 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CCDC34Q96HJ3 373 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 NT5C1AQ9BXI3 368 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 LRRC3Q9BY71 257 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CEP41Q9BYV8 373 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CLSTN2Q9H4D0 955 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 POLLQ9UGP5 575 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 TRMT112Q9UI30 125 aaKnown RBP5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CTNNA3Q9UI47 895 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 HOOK1Q9UJC3 728 aaKnown RBP5.6□□□□□ -1.51
LRCH3-214ENST00000473177 PCDHA4Q9UN74 947 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 CNPY2Q9Y2B0 182 aa5.6□□□□□ -1.51
LRCH3-214ENST00000473177 SH3TC1Q8TE82 1336 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 SALL3Q9BXA9 1300 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 IRS2Q9Y4H2 1338 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 DHX16O60231 1041 aaKnown RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 SMARCA5O60264 1052 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 KINO60870 393 aaKnown RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 SASH1O94885 1247 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 IFIT2P09913 472 aaKnown RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 ADH5P11766 374 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 CASTP20810 708 aaKnown RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 GJB2P29033 226 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 TNNT3P45378 269 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 GJA8P48165 433 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 IREB2P48200 963 aaKnown RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 AK2P54819 239 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 PRMT2P55345 433 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 UBXN2AP68543 259 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 ID3Q02535 119 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 SOX4Q06945 474 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 TERF2Q15554 542 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 ZSCAN25Q6NSZ9 544 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 FDX2Q6P4F2 183 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 GIMAP6Q6P9H5 292 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 TMCO3Q6UWJ1 677 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 MCM10Q7L590 875 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 PLA2G4DQ86XP0 818 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 C12orf50Q8NA57 414 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 RAET1EQ8TD07 263 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 BICD2Q8TD16 824 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 UBXN4Q92575 508 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 JARID2Q92833 1246 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 ERCC4Q92889 916 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 CLMNQ96JQ2 1002 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 TTC14Q96N46 770 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 MEIS3Q99687 375 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 FAM107BQ9H098 131 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 HYPKQ9NX55 129 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 ZHX1Q9UKY1 873 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-214ENST00000473177 FZD1Q9UP38 647 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 MTMR6Q9Y217 621 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 SNX14Q9Y5W7 946 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 SNCAIPQ9Y6H5 919 aa5.59□□□□□ -1.51
LRCH3-214ENST00000473177 DDX60Q8IY21 1712 aaKnown RBP5.58□□□□□ -1.52
LRCH3-214ENST00000473177 TMEM265A0A087WTH1 108 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 VPS37CA5D8V6 355 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-214ENST00000473177 C1QTNF9BB2RNN3 333 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 WNT10BO00744 389 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 TMPRSS2O15393 492 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 ALDH1L1O75891 902 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 DDX58O95786 925 aaKnown RBP5.58□□□□□ -1.52
LRCH3-214ENST00000473177 GJB1P08034 283 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 SKILP12757 684 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 CCL5P13501 91 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 GLB1P16278 677 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 ERVK-24P63145 666 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 CAP1Q01518 475 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 RPL6Q02878 288 aaKnown RBP5.58□□□□□ -1.52
LRCH3-214ENST00000473177 PAK2Q13177 524 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 MPP2Q14168 576 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 TAF7Q15545 349 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-214ENST00000473177 LRIT3Q3SXY7 679 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 HSP90AB3PQ58FF7 597 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 NAA16Q6N069 864 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-214ENST00000473177 LRFN4Q6PJG9 635 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 HDXQ7Z353 690 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 LRRC8AQ8IWT6 810 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 TDHQ8IZJ6 230 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 SPC24Q8NBT2 197 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 MNS1Q8NEH6 495 aa5.58□□□□□ -1.52
LRCH3-214ENST00000473177 TBC1D16Q8TBP0 767 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms