RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 F8VZ95 297 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 KIF4AO95239 1232 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 MTMR3Q13615 1198 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 SLC18A3Q16572 532 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 DNAJC10Q8IXB1 793 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 LRRC34Q8IZ02 419 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 LUC7LQ9NQ29 371 aaKnown RBP15.04■□□□□ -0
NPHP4-207ENST00000470763 ABCF3Q9NUQ8 709 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 PCDHA6Q9UN73 950 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 PCDHA8Q9Y5H6 950 aa15.04■□□□□ -0
NPHP4-207ENST00000470763 KRIT1O00522 736 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 NOL4O94818 638 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 GIGYF2Q6Y7W6 1299 aaKnown RBP15.03■□□□□ -0
NPHP4-207ENST00000470763 SCFD2Q8WU76 684 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 LRRC4BQ9NT99 713 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 A8MUI8 341 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 USP17L12C9JPN9 530 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 USP17L21D6R901 530 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 SHBGP04278 402 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 IFNAR2P48551 515 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 LETM2Q2VYF4 491 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 PARD3BQ8TEW8 1205 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.03■□□□□ -0
NPHP4-207ENST00000470763 ZNF317Q96PQ6 595 aaPredicted RBP15.03■□□□□ -0
NPHP4-207ENST00000470763 CD2APQ9Y5K6 639 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 MYH3P11055 1940 aa15.03■□□□□ -0
NPHP4-207ENST00000470763 FAM170AA1A519 330 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 UPP2O95045 317 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 KLHL30Q0D2K2 578 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 CAPRIN2Q6IMN6 1127 aaKnown RBP15.02■□□□□ -0
NPHP4-207ENST00000470763 HEATR3Q7Z4Q2 680 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 TAX1BP1Q86VP1 789 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 SPICE1Q8N0Z3 855 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 ZBTB10Q96DT7 871 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 TRIM51Q9BSJ1 452 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 GOPCQ9HD26 462 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
NPHP4-207ENST00000470763 GOLGB1Q14789 3259 aaKnown RBP15.02■□□□□ -0
NPHP4-207ENST00000470763 MROH5Q6ZUA9 1318 aa15.02■□□□□ -0
NPHP4-207ENST00000470763 VIMP08670 466 aaKnown RBP15.02□□□□□ -0.01
NPHP4-207ENST00000470763 LRRC55Q6ZSA7 311 aa15.02□□□□□ -0.01
NPHP4-207ENST00000470763 CEP120Q8N960 986 aa15.02□□□□□ -0.01
NPHP4-207ENST00000470763 CEP72Q9P209 647 aa15.02□□□□□ -0.01
NPHP4-207ENST00000470763 PAPPAQ13219 1627 aa15.02□□□□□ -0.01
NPHP4-207ENST00000470763 MYMKA6NI61 221 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 PGRMC1O00264 195 aaKnown RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 CCNT1O60563 726 aaKnown RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 CRELD2Q6UXH1 353 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 METTL13Q8N6R0 699 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 PCDH11XQ9BZA7 1347 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 PCDH11YQ9BZA8 1340 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 PDE8AO60658 829 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 TRPM8Q7Z2W7 1104 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 KIF2BQ8N4N8 673 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 UHMK1Q8TAS1 419 aaKnown RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 L3MBTL3Q96JM7 780 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 PRMT1Q99873 361 aaKnown RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 FAM167BQ9BTA0 163 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 YIPF3Q9GZM5 350 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 CUEDC2Q9H467 287 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 CNOT10Q9H9A5 744 aaKnown RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 BATF3Q9NR55 127 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 NOP53Q9NZM5 478 aaKnown RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 SAMD15Q9P1V8 674 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 USP11P51784 963 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 AMPD3Q01432 767 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-207ENST00000470763 MAEAQ7L5Y9 396 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 TLCD1Q96CP7 247 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 STK38LQ9Y2H1 464 aa15.01□□□□□ -0.01
NPHP4-207ENST00000470763 UBOX5O94941 541 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 OR52Z1P0C646 297 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 PPP1R2P41236 205 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 ALDH5A1P51649 535 aaPredicted RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 EIF1ADQ8N9N8 165 aaKnown RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 SAAL1Q96ER3 474 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 RIOK1Q9BRS2 568 aaKnown RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 MMTAG2Q9BU76 263 aaKnown RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 CASZ1Q86V15 1759 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 HGSO14964 777 aaPredicted RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 ADAT2Q7Z6V5 191 aaKnown RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 ATXN2LQ8WWM7 1075 aaKnown RBP15□□□□□ -0.01
NPHP4-207ENST00000470763 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.01
NPHP4-207ENST00000470763 MAGEF1Q9HAY2 307 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 UBR2Q8IWV8 1755 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
NPHP4-207ENST00000470763 M0R2N6 131 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 COPB2P35606 906 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 SEMA3FQ13275 785 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 SLC15A2Q16348 729 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-207ENST00000470763 SV2BQ7L1I2 683 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 ERICH1Q86X53 443 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 ACTRT1Q8TDG2 376 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
NPHP4-207ENST00000470763 TRAF5O00463 557 aa14.99□□□□□ -0.01
NPHP4-207ENST00000470763 SMNDC1O75940 238 aaKnown RBP eCLIP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms