RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 SFI1A8K8P3 1242 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 LCA5LO95447 670 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 VSNL1P62760 191 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 TUBB4BP68371 445 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 KNOP1Q1ED39 458 aaKnown RBP22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 TDRD12Q587J7 1177 aaKnown RBP22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 PSMD1Q99460 953 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 SH2D4AQ9H788 454 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 TLR2O60603 784 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 MOCS3O95396 460 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 EPM2AIP1Q7L775 607 aaPredicted RBP22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 OTOP1Q7RTM1 612 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 TPH2Q8IWU9 490 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 ANKRD13CQ8N6S4 541 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 CHURC1Q8WUH1 139 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 DRC1Q96MC2 740 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 RANBP17Q9H2T7 1088 aaKnown RBP22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 VCPKMTQ9H867 229 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 JADE2Q9NQC1 790 aa22.47■■□□□ 1.19
TUBGCP3-204ENST00000464139 ZBTB39O15060 712 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 EYA4O95677 639 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 DPEP1P16444 411 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 POLD1P28340 1107 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 MAGEA1P43355 309 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 KCNH2Q12809 1159 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 TERF2Q15554 542 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 ASTE1Q2TB18 679 aaPredicted RBP22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 UTP14CQ5TAP6 766 aaKnown RBP22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 LRCH2Q5VUJ6 765 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 DYDC2Q96IM9 177 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 ABCB6Q9NP58 842 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 STK24Q9Y6E0 443 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 EPS15P42566 896 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 BEND6Q5SZJ8 279 aaPredicted RBP22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 SFMBT2Q5VUG0 894 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 HSD17B14Q9BPX1 270 aa22.46■■□□□ 1.19
TUBGCP3-204ENST00000464139 MYH10P35580 1976 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 KCNA1Q09470 495 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 SUGCTQ9HAC7 445 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 FAM184BQ9ULE4 1060 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 TRAF3IP3Q9Y228 551 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 RGPD3A6NKT7 1758 aaPredicted RBP22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 RGPD4Q7Z3J3 1758 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 ANO9A1A5B4 782 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 TBCAO75347 108 aaKnown RBP22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 PSMD10O75832 226 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 SLITRK3O94933 977 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 KCNA3P22001 575 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 TRAF1Q13077 416 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 RINT1Q6NUQ1 792 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 HNRNPLLQ8WVV9 542 aaKnown RBP22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 ZBTB9Q96C00 473 aa22.45■■□□□ 1.18
TUBGCP3-204ENST00000464139 TACC1O75410 805 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 GCNT3O95395 438 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 CAP2P40123 477 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 RASSF7Q02833 373 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 ARID5AQ03989 594 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 TRIM58Q8NG06 486 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 SALL4Q9UJQ4 1053 aa22.44■■□□□ 1.18
TUBGCP3-204ENST00000464139 PDE2AO00408 941 aaPredicted RBP22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 POLR3GO15318 223 aaPredicted RBP22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 MAPK8IP2Q13387 824 aaPredicted RBP22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 ENOX2Q16206 610 aaKnown RBP22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 SLC9C1Q4G0N8 1177 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 MRPL11Q9Y3B7 192 aaKnown RBP22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 SSU72P8A0A1W2PR75 194 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 ACTN1P12814 892 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 RAPGEF1Q13905 1077 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 NBPF9Q3BBW0 867 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 LDHDQ86WU2 507 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 CAGE1Q8TC20 777 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 SLC5A5Q92911 643 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 UBXN6Q9BZV1 441 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 IKZF4Q9H2S9 585 aa22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 ARMCX3Q9UH62 379 aaPredicted RBP22.43■■□□□ 1.18
TUBGCP3-204ENST00000464139 ARP10275 920 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 SMC1AQ14683 1233 aaKnown RBP22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 ZCCHC17Q9NP64 241 aaKnown RBP22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 JRKLQ9Y4A0 524 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 PDXKO00764 312 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 CLIC2O15247 247 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 CALUO43852 315 aaPredicted RBP22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 GAS7O60861 476 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 ERLIN1O75477 346 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 AKAP3O75969 853 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 SERPING1P05155 500 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 GRIPAP1Q4V328 841 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 CEP55Q53EZ4 464 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 GANQ9H2C0 597 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 ZNRF3Q9ULT6 936 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 ASTN1O14525 1302 aa22.42■■□□□ 1.18
TUBGCP3-204ENST00000464139 SHTN1A0MZ66 631 aa22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 SLC9A1P19634 815 aa22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 CASP4P49662 377 aa22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 ARHGAP27Q6ZUM4 889 aa22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 ZNF771Q7L3S4 317 aaPredicted RBP22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 FRMD5Q7Z6J6 570 aa22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 FAM133AQ8N9E0 248 aa22.41■■□□□ 1.18
TUBGCP3-204ENST00000464139 SYN2Q92777 582 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms