RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 IL25Q9H293 177 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 GOLPH3LQ9H4A5 285 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 KCNK9Q9NPC2 374 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 PRR12Q9ULL5 1215 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 MAPK6Q16659 721 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 ANKRD13CQ8N6S4 541 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 BANK1Q8NDB2 785 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 PSPC1Q8WXF1 523 aaKnown RBP19.21■□□□□ 0.67
CHRD-208ENST00000460627 RPF1Q9H9Y2 349 aaKnown RBP19.21■□□□□ 0.67
CHRD-208ENST00000460627 Q3C1V9 767 aa19.21■□□□□ 0.67
CHRD-208ENST00000460627 MTMR3Q13615 1198 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 PDZD4Q76G19 769 aaPredicted RBP19.2■□□□□ 0.66
CHRD-208ENST00000460627 CTNND1O60716 968 aaKnown RBP19.2■□□□□ 0.66
CHRD-208ENST00000460627 SHC4Q6S5L8 630 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 CLEC10AQ8IUN9 316 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 GUF1Q8N442 669 aaKnown RBP19.2■□□□□ 0.66
CHRD-208ENST00000460627 XXYLT1Q8NBI6 393 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 BPIFA3Q9BQP9 254 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 VPS18Q9P253 973 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 SFI1A8K8P3 1242 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 KRIT1O00522 736 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 RASSF7Q02833 373 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 KRT81Q14533 505 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 SCYL2Q6P3W7 929 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 ZNF302Q9NR11 478 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 PCDHA10Q9Y5I2 948 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 TBX3O15119 743 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 LRRN2O75325 713 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 ARL1P40616 181 aaPredicted RBP19.2■□□□□ 0.66
CHRD-208ENST00000460627 MYO1EQ12965 1108 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 C10orf76Q5T2E6 689 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 SND1Q7KZF4 910 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHRD-208ENST00000460627 ANKS4BQ8N8V4 417 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 KCNB2Q92953 911 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 IFT122Q9HBG6 1241 aa19.2■□□□□ 0.66
CHRD-208ENST00000460627 COASYQ13057 564 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 CATSPER4Q7RTX7 472 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 GRK7Q8WTQ7 553 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 HAUS1Q96CS2 278 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 GABBR1Q9UBS5 961 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 POTEFA5A3E0 1075 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 POTEIP0CG38 1075 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 CAPN2P17655 700 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 POTEGQ6S5H5 508 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 POTEEQ6S8J3 1075 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 NBPF11Q86T75 865 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 ESYT2A0FGR8 921 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 MB21D1Q8N884 522 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 FBXO2Q9UK22 296 aaPredicted RBP19.19■□□□□ 0.66
CHRD-208ENST00000460627 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 MRPS9P82933 396 aaKnown RBP19.19■□□□□ 0.66
CHRD-208ENST00000460627 TROAPQ12815 778 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 C6orf163Q5TEZ5 329 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 PPP1R21Q6ZMI0 780 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 ZBTB33Q86T24 672 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 METTL23Q86XA0 190 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 MAP7D3Q8IWC1 876 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 LXNQ9BS40 222 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 FAM49AQ9H0Q0 323 aaPredicted RBP19.19■□□□□ 0.66
CHRD-208ENST00000460627 SNX25Q9H3E2 840 aa19.19■□□□□ 0.66
CHRD-208ENST00000460627 UBE2TQ9NPD8 197 aaPredicted RBP19.19■□□□□ 0.66
CHRD-208ENST00000460627 THAP12O43422 761 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 PHKA2P46019 1235 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 TMEM39BQ9GZU3 492 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 MED7O43513 233 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 SERPING1P05155 500 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 ALDH3A1P30838 453 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 ZBTB16Q05516 673 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 TRIM50Q86XT4 487 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 EIF2AK1Q9BQI3 630 aaKnown RBP19.18■□□□□ 0.66
CHRD-208ENST00000460627 TAF6LQ9Y6J9 622 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 CNTNAP5Q8WYK1 1306 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 CLDN3O15551 220 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 SWSAP1Q6NVH7 229 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 CPLX4Q7Z7G2 160 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 C2orf40Q9H1Z8 148 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 TUFT1Q9NNX1 390 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 TYW1Q9NV66 732 aaKnown RBP19.18■□□□□ 0.66
CHRD-208ENST00000460627 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
CHRD-208ENST00000460627 C3P01024 1663 aa19.18■□□□□ 0.66
CHRD-208ENST00000460627 NR3C1P04150 777 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 IL1R1P14778 569 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 UAP1Q16222 522 aaPredicted RBP19.17■□□□□ 0.66
CHRD-208ENST00000460627 GTF3C2Q8WUA4 911 aaPredicted RBP19.17■□□□□ 0.66
CHRD-208ENST00000460627 RSAD2Q8WXG1 361 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 ZNF653Q96CK0 615 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
CHRD-208ENST00000460627 SLC26A4O43511 780 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 IFNB1P01574 187 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 PRCPP42785 496 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 TXNRD3Q86VQ6 643 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 A6NNZ2 444 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 PP2D1A8MPX8 630 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 LGALS16A8MUM7 142 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 BRD3Q15059 726 aa19.17■□□□□ 0.66
CHRD-208ENST00000460627 KNOP1Q1ED39 458 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms