RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 ERCC6LQ2NKX8 1250 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 KBTBD12Q3ZCT8 623 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SV2CQ496J9 727 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 HP1BP3Q5SSJ5 553 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZBTB37Q5TC79 503 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 YOD1Q5VVQ6 348 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 MSL1Q68DK7 614 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CLEC4GQ6UXB4 293 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ILDR2Q71H61 639 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC80Q76M96 950 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ARHGAP22Q7Z5H3 698 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC50Q8IVM0 306 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SCUBE1Q8IWY4 988 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 RAVER1Q8IY67 606 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCAR2Q8N163 923 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 GALNT15Q8N3T1 639 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 AFAP1L2Q8N4X5 818 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 AFAP1Q8N556 730 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 UBR7Q8N806 425 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM13CQ8NE31 585 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ERMNQ8TAM6 284 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM71BQ8TC56 605 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 LMBR1Q8WVP7 490 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 LZICQ8WZA0 190 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 JAKMIP2Q96AA8 810 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 PPP1R14BQ96C90 147 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 INTS4Q96HW7 963 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 RBM41Q96IZ5 413 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC6A18Q96N87 628 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 NACC1Q96RE7 527 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CDC6Q99741 560 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 APBA2Q99767 749 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 TARS2Q9BW92 718 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 MRPL4Q9BYD3 311 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 TSGA10Q9BZW7 698 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 BRD8Q9H0E9 1235 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 MMADHCQ9H3L0 296 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 VIPAS39Q9H9C1 493 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 EBF2Q9HAK2 575 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 KIF9Q9HAQ2 790 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 JPH1Q9HDC5 661 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 INTS7Q9NVH2 962 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 HOXC10Q9NYD6 342 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SUCOQ9UBS9 1254 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ITGB1BP2Q9UKP3 347 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 RAB21Q9UL25 225 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 EID1Q9Y6B2 187 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CEP152O94986 1710 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 PZPP20742 1482 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ERCC6Q03468 1493 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 FGD5Q6ZNL6 1462 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ERBINQ96RT1 1412 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 DNAJC25-GNG10A0A024R161 153 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 A0A0A0MRY4 1105 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 GPR75-ASB3A0A0A6YYF3 556 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM83GA6ND36 823 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 BIN1O00499 593 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 POLR3GO15318 223 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 BBOX1O75936 387 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 PRPF6O94906 941 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 UBOX5O94941 541 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 EPHX1P07099 455 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SDSP20132 328 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 GCKP35557 465 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZNF75DP51815 510 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 YARSP54577 528 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 NAP1L1P55209 391 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 PPP2R2AP63151 447 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 FOXD4Q12950 439 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 PKP1Q13835 747 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 DHX8Q14562 1220 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 PTPN14Q15678 1187 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC4A8Q2Y0W8 1093 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ARHGAP29Q52LW3 1261 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 CMPK2Q5EBM0 449 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 PPM1JQ5JR12 505 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 VPS53Q5VIR6 699 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 NUGGCQ68CJ6 796 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC6A19Q695T7 634 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLC30A9Q6PML9 568 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SHISA2Q6UWI4 295 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM228AQ86W67 206 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 WFDC8Q8IUA0 241 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 HID1Q8IV36 788 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 MRPL41Q8IXM3 137 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 PHACTR4Q8IZ21 702 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 CEP112Q8N8E3 955 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 GALNT11Q8NCW6 608 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 MSANTD4Q8NCY6 345 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 NEK9Q8TD19 979 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 CACTINQ8WUQ7 758 aaKnown RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 GIMAP1Q8WWP7 306 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 RABGGTAQ92696 567 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 SMARCC1Q92922 1105 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 NACC2Q96BF6 587 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZBTB10Q96DT7 871 aa4.05□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMEM87BQ96K49 555 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms