RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 SSU72P8A0A1W2PR75 194 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 PDXKO00764 312 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 ERLIN1O75477 346 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 PSMD10O75832 226 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 SEC31AO94979 1220 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 GCNT3O95395 438 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 PLEKP08567 350 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 PNMA6AP0CW24 399 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 MYBP10242 640 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 EPB41P11171 864 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 RPL13P26373 211 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 MAGEA1P43355 309 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 AMPD2Q01433 879 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 CYP27A1Q02318 531 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 TNFAIP1Q13829 316 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 CC2D1AQ6P1N0 951 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 STXBP4Q6ZWJ1 553 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 TRAPPC11Q7Z392 1133 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 KRT26Q7Z3Y9 468 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 ALS2CR12Q96Q35 445 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 ZNF577Q9BSK1 485 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 ARFGAP3Q9NP61 516 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 MYOZ2Q9NPC6 264 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 LUC7LQ9NQ29 371 aaKnown RBP11.49□□□□□ -0.57
CPNE1-218ENST00000439806 PRDM10Q9NQV6 1147 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 RGL1Q9NZL6 768 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 TFR2Q9UP52 801 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
CPNE1-218ENST00000439806 MACROD2A1Z1Q3 448 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 RSPH10B2B2RC85 870 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 WNT10BO00744 389 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 EIF3DO15371 548 aaKnown RBP eCLIP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 ZRANB2O95218 330 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■■□□□ 12.9
CPNE1-218ENST00000439806 LCA5LO95447 670 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 AFPP02771 609 aaKnown RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 SERPING1P05155 500 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 ICAM1P05362 532 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 RSPH10BP0C881 870 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 ZSCAN20P17040 1043 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 CASP5P51878 434 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 TGFB2P61812 414 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 KCNH2Q12809 1159 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 RAPGEF1Q13905 1077 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 EPHA7Q15375 998 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 ASIC2Q16515 512 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 NBPF9Q3BBW0 867 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 CEP55Q53EZ4 464 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 DALRD3Q5D0E6 543 aaKnown RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 RINT1Q6NUQ1 792 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 OTOP1Q7RTM1 612 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 MCF2L2Q86YR7 1114 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 MYCT1Q8N699 235 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 MSANTD4Q8NCY6 345 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 CAGE1Q8TC20 777 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 NEK9Q8TD19 979 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 HOOK2Q96ED9 719 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 NACC1Q96RE7 527 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 GLIS2Q9BZE0 524 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 LACRTQ9GZZ8 138 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 FAM53CQ9NYF3 392 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 ARMCX3Q9UH62 379 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-218ENST00000439806 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 UBE4BO95155 1302 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 MYH10P35580 1976 aa11.48□□□□□ -0.57
CPNE1-218ENST00000439806 FRMPD4Q14CM0 1322 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 CCDC151A5D8V7 595 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 ENC1O14682 589 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 SLC16A3O15427 465 aaKnown RBP11.47□□□□□ -0.57
CPNE1-218ENST00000439806 NR3C1P04150 777 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 TUBBP07437 444 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 RHOXF2BP0C7M4 288 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 ARP10275 920 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 PTGER2P43116 358 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms