RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 EHHADHQ08426 723 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 APOBRQ0VD83 1088 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 DGKZQ13574 1117 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 TCEA2Q15560 299 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 C2orf27AQ580R0 203 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 HECTD3Q5T447 861 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 CIAPIN1Q6FI81 312 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 LDHAL6AQ6ZMR3 332 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 RUFY3Q7L099 469 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 HS2ST1Q7LGA3 356 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 SRLQ86TD4 932 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 NIM1KQ8IY84 436 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 TBC1D22AQ8WUA7 517 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 ARHGEF2Q92974 986 aaKnown RBP6.2□□□□□ -1.42
RFC3-202ENST00000434425 ZNF775Q96BV0 537 aaPredicted RBP6.2□□□□□ -1.42
RFC3-202ENST00000434425 HOOK2Q96ED9 719 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 TRIM11Q96F44 468 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 RBM17Q96I25 401 aaKnown RBP6.2□□□□□ -1.42
RFC3-202ENST00000434425 GMCL1Q96IK5 515 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 CRAMP1Q96RY5 1269 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 KATNAL1Q9BW62 490 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 CAAP1Q9H8G2 361 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 VEZTQ9HBM0 779 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 ARGLU1Q9NWB6 273 aaPredicted RBP6.2□□□□□ -1.42
RFC3-202ENST00000434425 AIPL1Q9NZN9 384 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 GJD2Q9UKL4 321 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 TMEM98Q9Y2Y6 226 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 PCDHGA11Q9Y5H2 935 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 EPN1Q9Y6I3 576 aaPredicted RBP6.2□□□□□ -1.42
RFC3-202ENST00000434425 MAP3K15Q6ZN16 1313 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 TAF1P21675 1872 aa6.2□□□□□ -1.42
RFC3-202ENST00000434425 A0A087X0B3 334 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 TBKBP1A7MCY6 615 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 SFI1A8K8P3 1242 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 AKR1B15C9JRZ8 316 aaPredicted RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 H0YHG0 523 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 INO80B-WBP1J3KQ70 363 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 CASQ2O14958 399 aaPredicted RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 MCF2LO15068 1137 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 RAD17O75943 681 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 ABLIM3O94929 683 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 SLC4A1P02730 911 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 KRT1P04264 644 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 IMPDH2P12268 514 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 KRT13P13646 458 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 P4HA1P13674 534 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 GARTP22102 1010 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 WEE1P30291 646 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 MXI1P50539 228 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 RAB15P59190 212 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 NFKB2Q00653 900 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 LAPTM4AQ15012 233 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 ARHGEF6Q15052 776 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 CCDC178Q5BJE1 867 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 KIAA0319Q5VV43 1072 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 AP1ARQ63HQ0 302 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 PDE12Q6L8Q7 609 aaKnown RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 CXorf57Q6NSI4 855 aaKnown RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 RALYLQ86SE5 291 aaKnown RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 SPATS2Q86XZ4 545 aaKnown RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 RBM12BQ8IXT5 1001 aaKnown RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 ZNF34Q8IZ26 560 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 CARNMT1Q8N4J0 409 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 TAB3Q8N5C8 712 aaPredicted RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.19□□□□□ -1.42
RFC3-202ENST00000434425 FBF1Q8TES7 1133 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 DPF3Q92784 378 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 SLC10A4Q96EP9 437 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 CFAP36Q96G28 342 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 HHIPL1Q96JK4 782 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 PLEKHF1Q96S99 279 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 NACA2Q9H009 215 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 ELAC1Q9H777 363 aaKnown RBP6.19□□□□□ -1.42
RFC3-202ENST00000434425 SEPT3Q9UH03 358 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 ZNRF3Q9ULT6 936 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 TRAF3IP3Q9Y228 551 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 PCDHGC5Q9Y5F6 944 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 BRCA2P51587 3418 aa6.19□□□□□ -1.42
RFC3-202ENST00000434425 SYNJ2BP-COX16A0A087WUM0 186 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 RNF223E7ERA6 249 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 CA12O43570 354 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 KLHL41O60662 606 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 B3GALNT1O75752 331 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 GFPT2O94808 682 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 NTSR2O95665 410 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 CAPNS1P04632 268 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 MUTP22033 750 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 MPP1Q00013 466 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 CACNB2Q08289 660 aaPredicted RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 PRPF4BQ13523 1007 aaKnown RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 RASA2Q15283 850 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 SLC14A2Q15849 920 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 RRP12Q5JTH9 1297 aaKnown RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 METTL24Q5JXM2 366 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 NUGGCQ68CJ6 796 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 NEK10Q6ZWH5 1172 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 FASTKD5Q7L8L6 764 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms