RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 CAPNS2Q96L46 248 aa8□□□□□ -1.13
GTF2A1-202ENST00000434192 ZNF408Q9H9D4 720 aa8□□□□□ -1.13
GTF2A1-202ENST00000434192 KCNK4Q9NYG8 393 aa8□□□□□ -1.13
GTF2A1-202ENST00000434192 BRPF3Q9ULD4 1205 aa8□□□□□ -1.13
GTF2A1-202ENST00000434192 ZBTB21Q9ULJ3 1066 aa8□□□□□ -1.13
GTF2A1-202ENST00000434192 CCDC196A0A1B0GTZ2 297 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 CPLX1O14810 134 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 CDKL5O76039 1030 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 GH2P01242 217 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 ASNSP08243 561 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 TOP1P11387 765 aaKnown RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 RXRAP19793 462 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 PDIA3P30101 505 aaKnown RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 NOVP48745 357 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 ST3GAL1Q11201 340 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 SCRN1Q12765 414 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 RAB3GAP1Q15042 981 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 XP32Q5T750 250 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 RCSD1Q6JBY9 416 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 CYP4F22Q6NT55 531 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 FOXD4L3Q6VB84 417 aaPredicted RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 MIGA2Q7L4E1 593 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 RAB11FIP4Q86YS3 637 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 LRRC47Q8N1G4 583 aaKnown RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 TMEM130Q8N3G9 435 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 NECAB1Q8N987 351 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 CTCFLQ8NI51 663 aaPredicted RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 NUP133Q8WUM0 1156 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 ANKS1AQ92625 1134 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 WRNIP1Q96S55 665 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 MYL10Q9BUA6 226 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 ADAM19Q9H013 955 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 SH2D4AQ9H788 454 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 GBA2Q9HCG7 927 aaPredicted RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 IL17RBQ9NRM6 502 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 GINM1Q9NU53 330 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 RBM28Q9NW13 759 aaKnown RBP7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 MTMR4Q9NYA4 1195 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 SMC3Q9UQE7 1217 aa7.99□□□□□ -1.13
GTF2A1-202ENST00000434192 A0A0G2JMZ2 1700 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 PTPDC1A2A3K4 754 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 H3BRB1 525 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 PDE2AO00408 941 aaPredicted RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 DDX3YO15523 660 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 WISP1O95388 367 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 GLB1P16278 677 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 KIF5BP33176 963 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 CAP2P40123 477 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 HUNKP57058 714 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 FKBP1BP68106 108 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 CCT2P78371 535 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 HMGN5P82970 282 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 ATP2B2Q01814 1243 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 MAP2K1Q02750 393 aaPredicted RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 EHHADHQ08426 723 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 SEPT2Q15019 361 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 DLK2Q6UY11 383 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 CLEC10AQ8IUN9 316 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 MAP3K14Q99558 947 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 OSMRQ99650 979 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 TMEM47Q9BQJ4 181 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 LLPHQ9BRT6 129 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 TUT1Q9H6E5 874 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 KANSL2Q9H9L4 492 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 NCOA5Q9HCD5 579 aaKnown RBP7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 KIF3AQ9Y496 699 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 ZSWIM8A7E2V4 1837 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 STK36Q9NRP7 1315 aa7.98□□□□□ -1.13
GTF2A1-202ENST00000434192 COL11A1P12107 1806 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 FOXN1O15353 648 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 CTNND1O60716 968 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 ICMTO60725 284 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 EEF2P13639 858 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 MAP2K2P36507 400 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 TROAPQ12815 778 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 RRP1BQ14684 758 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 GRM4Q14833 912 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 SHROOM1Q2M3G4 852 aaPredicted RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 ASPRV1Q53RT3 343 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 PRAMEF18Q5VWM3 479 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 RGMBQ6NW40 437 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 ACAD11Q709F0 780 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 SCYL3Q8IZE3 742 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 C2orf69Q8N8R5 385 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 RETREG2Q8NC44 543 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 NSUN7Q8NE18 718 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 KLHDC7BQ96G42 594 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 FEZ1Q99689 392 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 CWC22Q9HCG8 908 aaKnown RBP7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 PICK1Q9NRD5 415 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 NYAP2Q9P242 653 aa7.97□□□□□ -1.13
GTF2A1-202ENST00000434192 CLIP2Q9UDT6 1046 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms