RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
HOXD3-202ENST00000410016 CIITAP33076 1130 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
HOXD3-202ENST00000410016 SLC7A5Q01650 507 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 KNOP1Q1ED39 458 aaKnown RBP17.47■□□□□ 0.39
HOXD3-202ENST00000410016 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 STRIP1Q5VSL9 837 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 MCTP2Q6DN12 878 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.47■□□□□ 0.39
HOXD3-202ENST00000410016 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 GMCL1Q96IK5 515 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 MS4A14Q96JA4 679 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 ADAMTS1Q9UHI8 967 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 NDUFB10O96000 172 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
HOXD3-202ENST00000410016 JAG1P78504 1218 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 FRMD5Q7Z6J6 570 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 FAM133AQ8N9E0 248 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 RBM12Q9NTZ6 932 aaKnown RBP17.47■□□□□ 0.39
HOXD3-202ENST00000410016 PCDHGC5Q9Y5F6 944 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 PALMO75781 387 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 PDE6BP35913 854 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 PAFAH1B1P43034 410 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 FKBP1AP62942 108 aaKnown RBP17.46■□□□□ 0.39
HOXD3-202ENST00000410016 RAPGEF1Q13905 1077 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 CCDC181Q5TID7 509 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 IRF2BP2Q7Z5L9 587 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 FBXO11Q86XK2 927 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 COL23A1Q86Y22 540 aaPredicted RBP17.46■□□□□ 0.39
HOXD3-202ENST00000410016 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 STIM2Q9P246 746 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 RNF14Q9UBS8 474 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 HDAC9Q9UKV0 1011 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 MSH4O15457 936 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 GDF11O95390 407 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
HOXD3-202ENST00000410016 NAP1L1P55209 391 aaKnown RBP17.46■□□□□ 0.39
HOXD3-202ENST00000410016 ARID5AQ03989 594 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 KLHL30Q0D2K2 578 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 USH1GQ495M9 461 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 ERMNQ8TAM6 284 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 PACSIN1Q9BY11 444 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 PLCB1Q9NQ66 1216 aa17.46■□□□□ 0.39
HOXD3-202ENST00000410016 PDXKO00764 312 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 ACTN1P12814 892 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 TAL1P17542 331 aaPredicted RBP17.45■□□□□ 0.38
HOXD3-202ENST00000410016 SLC9A1P19634 815 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 KIAA0753Q2KHM9 967 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 CFAP221Q4G0U5 840 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 BCAS3Q9H6U6 928 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 LUC7LQ9NQ29 371 aaKnown RBP17.45■□□□□ 0.38
HOXD3-202ENST00000410016 ARMCX3Q9UH62 379 aaPredicted RBP17.45■□□□□ 0.38
HOXD3-202ENST00000410016 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 MYBP10242 640 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.38
HOXD3-202ENST00000410016 ABCB5Q2M3G0 1257 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 SYDE2Q5VT97 1194 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 BTNL9Q6UXG8 535 aa17.45■□□□□ 0.38
HOXD3-202ENST00000410016 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 RSPH10B2B2RC85 870 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 AKAP3O75969 853 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 RSPH10BP0C881 870 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 UCHL3P15374 230 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 TNFRSF8P28908 595 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 PTK2Q05397 1052 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 ASIC2Q16515 512 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 BMT2Q1RMZ1 405 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 GLE1Q53GS7 698 aaKnown RBP17.44■□□□□ 0.38
HOXD3-202ENST00000410016 LEKR1Q6ZMV7 388 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 SND1Q7KZF4 910 aaKnown RBP eCLIP17.44■□□□□ 0.38
HOXD3-202ENST00000410016 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.44■□□□□ 0.38
HOXD3-202ENST00000410016 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
HOXD3-202ENST00000410016 GOLGA6BA6NDN3 693 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 EML1O00423 815 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 FTCDO95954 541 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 CYP3A4P08684 503 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 PON1P27169 355 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 HOXA13P31271 388 aaPredicted RBP17.44■□□□□ 0.38
HOXD3-202ENST00000410016 EPS15P42566 896 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
HOXD3-202ENST00000410016 BHMT2Q9H2M3 363 aa17.44■□□□□ 0.38
HOXD3-202ENST00000410016 A0A1W2PRG0 241 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 AFPP02771 609 aaKnown RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 POLD1P28340 1107 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 ENOX2Q16206 610 aaKnown RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 ZNF571Q7Z3V5 609 aaPredicted RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 POLR3CQ9BUI4 534 aaPredicted RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 SERPINA10Q9UK55 444 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms