RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GM2AP17900 193 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 WTAPQ15007 396 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 TSNAXIP1Q2TAA8 658 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 HGSNATQ68CP4 663 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
HERC3-203ENST00000407637 RMDN2Q96LZ7 410 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 TRAPPC9Q96Q05 1148 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 PACSIN1Q9BY11 444 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 EPB41L4BQ9H329 900 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 ETNK1Q9HBU6 452 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
HERC3-203ENST00000407637 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
HERC3-203ENST00000407637 SPATA31A3Q5VYP0 1347 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 RGS16O15492 202 aaPredicted RBP13.92□□□□□ -0.18
HERC3-203ENST00000407637 ATP6V1G1O75348 118 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
HERC3-203ENST00000407637 LRRC14Q15048 493 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 RPS6KA1Q15418 735 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 MGARPQ8TDB4 240 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 RAB3IPQ96QF0 476 aaPredicted RBP13.92□□□□□ -0.18
HERC3-203ENST00000407637 BCL9O00512 1426 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 TCP11X1B4DZS4 312 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 CCNE1P24864 410 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 PTDSS1P48651 473 aaKnown RBP13.92□□□□□ -0.18
HERC3-203ENST00000407637 DIXDC1Q155Q3 683 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 NAALADL2Q58DX5 795 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 ACBD5Q5T8D3 534 aaPredicted RBP13.92□□□□□ -0.18
HERC3-203ENST00000407637 C14orf37Q86TY3 774 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 IQCDQ96DY2 449 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
HERC3-203ENST00000407637 FMO2Q99518 471 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 NDNQ99608 321 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 TRIM51Q9BSJ1 452 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 DDX23Q9BUQ8 820 aaKnown RBP13.92□□□□□ -0.18
HERC3-203ENST00000407637 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 RXFP1Q9HBX9 757 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 PREBQ9HCU5 417 aa13.92□□□□□ -0.18
HERC3-203ENST00000407637 E7ENQ6 273 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 KRIT1O00522 736 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 CCNB1P14635 433 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 XBP1P17861 261 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 ADD2P35612 726 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 PKN1Q16512 942 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 MUM1Q2TAK8 710 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 PIGOQ8TEQ8 1089 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 FAM136AQ96C01 138 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 PGM2Q96G03 612 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 NUDCD1Q96RS6 583 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 NLRC4Q9NPP4 1024 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 DISC1Q9NRI5 854 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 SCOCQ9UIL1 159 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 SSU72P8A0A1W2PR75 194 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 PP2D1A8MPX8 630 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 RBAK-RBAKDNI3L0D1 243 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 PGRMC1O00264 195 aaKnown RBP13.91□□□□□ -0.18
HERC3-203ENST00000407637 BAG3O95817 575 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 MAGEA10P43363 369 aaPredicted RBP13.91□□□□□ -0.18
HERC3-203ENST00000407637 CNGA2Q16280 664 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 PABPC1LQ4VXU2 614 aaKnown RBP13.91□□□□□ -0.18
HERC3-203ENST00000407637 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 UBAP2Q5T6F2 1119 aaKnown RBP13.91□□□□□ -0.18
HERC3-203ENST00000407637 IRGCQ6NXR0 463 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 ANKLE1Q8NAG6 615 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 UHMK1Q8TAS1 419 aaKnown RBP13.91□□□□□ -0.18
HERC3-203ENST00000407637 DYDC1Q8WWB3 177 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 TXLNGYQ9BZA5 131 aa13.91□□□□□ -0.18
HERC3-203ENST00000407637 DIP2BQ9P265 1576 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 BICDL2A1A5D9 508 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 GJB6O95452 261 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 SLCO1A2P46721 670 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 SERPINB4P48594 390 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
HERC3-203ENST00000407637 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERC3-203ENST00000407637 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 TNFRSF25Q93038 417 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 TRIM7Q9C029 511 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.9□□□□□ -0.18
HERC3-203ENST00000407637 GALNT8Q9NY28 637 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 ARL2BPQ9Y2Y0 163 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 AKAP11Q9UKA4 1901 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 GSTT1P30711 240 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 PSMC4P43686 418 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 DENND2CQ68D51 928 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 PIK3AP1Q6ZUJ8 805 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 TTC8Q8TAM2 541 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 ACTRT1Q8TDG2 376 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 ATP8B4Q8TF62 1192 aa13.9□□□□□ -0.18
HERC3-203ENST00000407637 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
HERC3-203ENST00000407637 EPB41L4AQ9HCS5 686 aaPredicted RBP13.9□□□□□ -0.18
HERC3-203ENST00000407637 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
HERC3-203ENST00000407637 IDH1O75874 414 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms