RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 KRIT1O00522 736 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TLR2O60603 784 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 BBOX1O75936 387 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 KRT13P13646 458 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.193e-9■■■■■ 34.7
PPP4R1-202ENST00000400555 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 FBXO11Q86XK2 927 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 BAP1Q92560 729 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 ZIM3Q96PE6 472 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 REEP2Q9BRK0 252 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 CEP72Q9P209 647 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 CYP11B2P19099 503 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 EPHB4P54760 987 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 ZNF211Q13398 564 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TTC31Q49AM3 519 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 CATSPER3Q86XQ3 398 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 VEZTQ9HBM0 779 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 HOMER2Q9NSB8 354 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 GH2P01242 217 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 IRAK1P51617 712 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 TNNC1P63316 161 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 PPFIA1Q13136 1202 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 PAK2Q13177 524 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 DHX36Q9H2U1 1008 aaKnown RBP13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 F5H6K3 240 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 SP4Q02446 784 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 KLRC3Q07444 240 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 PDIA5Q14554 519 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 GPATCH4Q5T3I0 446 aaKnown RBP13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 ELMO3Q96BJ8 720 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 DNAJC19Q96DA6 116 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 SORBS3O60504 671 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 GYS1P13807 737 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 SEC24CP53992 1094 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 CPXCR1Q8N123 301 aa13.87□□□□□ -0.19
PPP4R1-202ENST00000400555 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 PPP1R12BO60237 982 aaPredicted RBP13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 AMACRQ9UHK6 382 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 AGPSO00116 658 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 RAD51CO43502 376 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 AFPP02771 609 aaKnown RBP13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 SHMT1P34896 483 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 CRKP46108 304 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 PHLDB2Q86SQ0 1253 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 CELF4Q9BZC1 486 aaKnown RBP13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 TARSL2A2RTX5 802 aaKnown RBP13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 E7EVH7 732 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 CCDC25Q86WR0 208 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 KDM3AQ9Y4C1 1321 aa13.86□□□□□ -0.19
PPP4R1-202ENST00000400555 H2AFZP0C0S5 128 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 PSMD2Q13200 908 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 MUM1L1Q5H9M0 696 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 ZFYVE27Q5T4F4 411 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 ZNF746Q6NUN9 644 aaPredicted RBP13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 H2AFVQ71UI9 128 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 MIGA2Q7L4E1 593 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 AMNQ9BXJ7 453 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 HGSO14964 777 aaPredicted RBP13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 EXOC3O60645 756 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 UCHL3P15374 230 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 CTNNA1P35221 906 aaKnown RBP13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 SLC18A3Q16572 532 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 ABCB5Q2M3G0 1257 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 PSD3Q9NYI0 1048 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 GBP6Q6ZN66 633 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 ZNF571Q7Z3V5 609 aaPredicted RBP13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 RUSC1Q9BVN2 902 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
PPP4R1-202ENST00000400555 AKAP3O75969 853 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 NOL4O94818 638 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 NR3C1P04150 777 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 COG2Q14746 738 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 HS2ST1Q7LGA3 356 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 OTUD6BQ8N6M0 293 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 CASKIN2Q8WXE0 1202 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 CACNA1SQ13698 1873 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 CALUO43852 315 aaPredicted RBP13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 FLOT1O75955 427 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 ITGA4P13612 1032 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 RPL13P26373 211 aaKnown RBP13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 DDR1Q08345 913 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 KNOP1Q1ED39 458 aaKnown RBP13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 HGSNATQ68CP4 663 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 MMGT1Q8N4V1 131 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 ECM29Q5VYK3 1845 aa13.84□□□□□ -0.19
PPP4R1-202ENST00000400555 DAPK3O43293 454 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms