RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CEP72Q9P209 647 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 NUB1Q9Y5A7 615 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 ATP7BP35670 1465 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 SSU72P8A0A1W2PR75 194 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 MAFGO15525 162 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 GSTT1P30711 240 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CHRNA3P32297 505 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 KRT80Q6KB66 452 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 RASSF3Q86WH2 238 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 KIRREL3Q8IZU9 778 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 AFAP1L2Q8N4X5 818 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 AK8Q96MA6 479 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 TEX33O43247 280 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 HSD17B3P37058 310 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 TEDDM1Q5T9Z0 273 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 ATG16L1Q676U5 607 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 CRACR2BQ8N4Y2 399 aaPredicted RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 USP33Q8TEY7 942 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 PPP2R3CQ969Q6 453 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 LENG1Q96BZ8 264 aaPredicted RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 ZNF212Q9UDV6 495 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 PPIP5K2O43314 1243 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 PALMO75781 387 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 SF3A3Q12874 501 aaKnown RBP eCLIP10.75□□□□□ -0.698e-9■■■□□ 15.5
PTPRM-203ENST00000400060 NCAPHQ15003 741 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 RARS2Q5T160 578 aaKnown RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 CCDC89Q8N998 374 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 RNPEPL1Q9HAU8 725 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 GPR108Q9NPR9 543 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 TCP11X1B4DZS4 312 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 KRT5P13647 590 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 KRT81Q14533 505 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 LMBR1LQ6UX01 489 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 STAG2Q8N3U4 1231 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 DDHD1Q8NEL9 900 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 DNAJC7Q99615 494 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 CRNKL1Q9BZJ0 848 aaKnown RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 VPS37BQ9H9H4 285 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 GDF3Q9NR23 364 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 IPO5O00410 1097 aaKnown RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 HSPD1P10809 573 aaKnown RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 STAT1P42224 750 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 EPM2AIP1Q7L775 607 aaPredicted RBP10.75□□□□□ -0.69
PTPRM-203ENST00000400060 SH3TC2Q8TF17 1288 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 AGAP11Q8TF27 550 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 FAXDC2Q96IV6 333 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 TIMMDC1Q9NPL8 285 aa10.75□□□□□ -0.69
PTPRM-203ENST00000400060 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 ATP9AO75110 1047 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 FTCDO95954 541 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 RCAN1P53805 252 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 C1orf146Q5VVC0 180 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 PCNX4Q63HM2 1172 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 HAUS3Q68CZ6 603 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 PATL1Q86TB9 770 aaKnown RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 CABP7Q86V35 215 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 ATP11CQ8NB49 1132 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 GDAP1Q8TB36 358 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 ATP2A3Q93084 1043 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 EBF2Q9HAK2 575 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 EHD2Q9NZN4 543 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 SAP30BPQ9UHR5 308 aaKnown RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 LEMD3Q9Y2U8 911 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 SETBP1Q9Y6X0 1596 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 NUP107P57740 925 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 LRRC63Q05C16 580 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 MTHFD1LQ6UB35 978 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 SYDE1Q6ZW31 735 aaPredicted RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 MAPK8IP1Q9UQF2 711 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 KDM6AO15550 1401 aaPredicted RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 GYPCP04921 128 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 BCRP11274 1271 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 EEF1DP29692 281 aaKnown RBP10.74□□□□□ -0.69
PTPRM-203ENST00000400060 LRRC34Q8IZ02 419 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 NDNQ99608 321 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 SNRKQ9NRH2 765 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 ADCY8P40145 1251 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 SGSM1Q2NKQ1 1148 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 GRAMD1BQ3KR37 738 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 MMEL1Q495T6 779 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 TTMPQ5BVD1 217 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 KRT25Q7Z3Z0 450 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 CTAGE3PQ8IX95 158 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 TEKT1Q969V4 418 aa10.74□□□□□ -0.69
PTPRM-203ENST00000400060 GCP02774 474 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 GRIN1Q05586 938 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 IKQ13123 557 aaPredicted RBP10.73□□□□□ -0.69
PTPRM-203ENST00000400060 B3GNT6Q6ZMB0 384 aa10.73□□□□□ -0.69
PTPRM-203ENST00000400060 HINFPQ9BQA5 517 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms