RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GRB10Q13322 594 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 PEX26Q7Z412 305 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 H0YCG3 227 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 TNNC1P63316 161 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 MAATS1Q7Z4T9 603 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 CDC23Q9UJX2 597 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 CEP83Q9Y592 693 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 GOLGA8IPA6NC78 632 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 GOLGA8JA6NMD2 632 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 LRRN2O75325 713 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 KRT76Q01546 638 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 STXBP2Q15833 593 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
SCAF4-202ENST00000399804 FAM160B1Q5W0V3 765 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 ATG4CQ96DT6 458 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 CEP63Q96MT8 703 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 PSMD1Q99460 953 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 MYO1AQ9UBC5 1043 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 ANKRD62A6NC57 917 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 WNT7AO00755 349 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 N4BP1O75113 896 aaKnown RBP15.35■□□□□ 0.05
SCAF4-202ENST00000399804 JAK3P52333 1124 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 E4F1Q66K89 784 aaPredicted RBP15.35■□□□□ 0.05
SCAF4-202ENST00000399804 FAM83AQ86UY5 434 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 TAX1BP1Q86VP1 789 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 ZBTB8OSQ8IWT0 167 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 CCDC170Q8IYT3 715 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 GMCL1P1Q8NEA9 526 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 ADAMTS1Q9UHI8 967 aa15.35■□□□□ 0.05
SCAF4-202ENST00000399804 RPA1P27694 616 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 FXR1P51114 621 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCAF4-202ENST00000399804 CCNA1P78396 465 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
SCAF4-202ENST00000399804 DPP9Q86TI2 863 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 PRDM4Q9UKN5 801 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 KRT19P08727 400 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 WHAMMP3Q1A5X7 153 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 C8orf74Q6P047 294 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 CATSPER3Q86XQ3 398 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 MSH4O15457 936 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
SCAF4-202ENST00000399804 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
SCAF4-202ENST00000399804 REEP2Q9BRK0 252 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 GABBR1Q9UBS5 961 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 ADGRG1Q9Y653 693 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 PHLPP2Q6ZVD8 1323 aa15.34■□□□□ 0.05
SCAF4-202ENST00000399804 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.05
SCAF4-202ENST00000399804 KIF11P52732 1056 aa15.33■□□□□ 0.05
SCAF4-202ENST00000399804 SWSAP1Q6NVH7 229 aa15.33■□□□□ 0.05
SCAF4-202ENST00000399804 CCDC113Q9H0I3 377 aa15.33■□□□□ 0.05
SCAF4-202ENST00000399804 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.33■□□□□ 0.05
SCAF4-202ENST00000399804 FBXO40Q9UH90 709 aa15.33■□□□□ 0.05
SCAF4-202ENST00000399804 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
SCAF4-202ENST00000399804 CFAP221Q4G0U5 840 aa15.33■□□□□ 0.04
SCAF4-202ENST00000399804 CCDC50Q8IVM0 306 aa15.33■□□□□ 0.04
SCAF4-202ENST00000399804 NEK9Q8TD19 979 aa15.33■□□□□ 0.04
SCAF4-202ENST00000399804 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.04
SCAF4-202ENST00000399804 COL18A1P39060 1754 aa15.33■□□□□ 0.04
SCAF4-202ENST00000399804 GFPT2O94808 682 aa15.33■□□□□ 0.04
SCAF4-202ENST00000399804 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.04
SCAF4-202ENST00000399804 TYW1Q9NV66 732 aaKnown RBP15.33■□□□□ 0.04
SCAF4-202ENST00000399804 SLC16A4O15374 487 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 CD19P15391 556 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 MARK3P27448 753 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 PPP2R5AQ15172 486 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 TC2NQ8N9U0 490 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 SLC17A8Q8NDX2 589 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 CWC15Q9P013 229 aaKnown RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 LRP6O75581 1613 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 A0A1W2PQC6 194 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 SARSP49591 514 aaKnown RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 GABPAQ06546 454 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 GPR161Q8N6U8 529 aaKnown RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 TUFT1Q9NNX1 390 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 LRRC53A6NM62 1247 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 HSF2BPO75031 334 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 NR3C2P08235 984 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 DAAM2Q86T65 1068 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 CYP2W1Q8TAV3 490 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 CHP1Q99653 195 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 ELP3Q9H9T3 547 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 C1orf112Q9NSG2 853 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 MKRN1Q9UHC7 482 aaKnown RBP15.32■□□□□ 0.04
SCAF4-202ENST00000399804 PKD1L3Q7Z443 1732 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 FAM237AA0A1B0GTK4 181 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 INO80B-WBP1J3KQ70 363 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 SREBF1P36956 1147 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 MXI1P50539 228 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 PSMC5P62195 406 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 EHHADHQ08426 723 aa15.32■□□□□ 0.04
SCAF4-202ENST00000399804 SLC30A10Q6XR72 485 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms