RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 PPP1R16BQ96T49 567 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 RAB3IPQ96QF0 476 aaPredicted RBP17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 CALN1Q9BXU9 219 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 ECE1P42892 770 aa17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 SNRNP48Q6IEG0 339 aaKnown RBP17.53■□□□□ 0.4
PCDHA12-201ENST00000398631 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 PHLDB2Q86SQ0 1253 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 PIGOQ8TEQ8 1089 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 PPP1R12CQ9BZL4 782 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 RAVER2Q9HCJ3 691 aaKnown RBP17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 POC1B-GALNT4F8VUJ3 575 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 ECEL1O95672 775 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 ACTN1P12814 892 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 KRT76Q01546 638 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
PCDHA12-201ENST00000398631 ARPP19P56211 112 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 APOBEC3FQ8IUX4 373 aaKnown RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 CPVLQ9H3G5 476 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 RNF146Q9NTX7 359 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 KCNQ2O43526 872 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 BUB1BO60566 1050 aaPredicted RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 HEXIM1O94992 359 aaKnown RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 PRELPP51888 382 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 SPP2Q13103 211 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 NFIXQ14938 502 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 PTPN21Q16825 1174 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 RESP18Q5W5W9 173 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 SP8Q8IXZ3 490 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 THNSL1Q8IYQ7 743 aa17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 SKA2Q8WVK7 121 aaPredicted RBP17.52■□□□□ 0.39
PCDHA12-201ENST00000398631 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ZNF579Q8NAF0 562 aaKnown RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 HEXIM2Q96MH2 286 aaKnown RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ATP6V0A4Q9HBG4 840 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 GJB4Q9NTQ9 266 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 CRB1P82279 1406 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ABCB11O95342 1321 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 PRPSAP2O60256 369 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 RBBP5Q15291 538 aaKnown RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 PBKQ96KB5 322 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 F5H6K3 240 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 KLRC3Q07444 240 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 TCP11X2Q5H9J9 407 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 DSTYKQ6XUX3 929 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 MB21D2Q8IYB1 491 aaPredicted RBP17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 DNAAF3Q8N9W5 541 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 RNF139Q8WU17 664 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 POTEMA6NI47 508 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 SFI1A8K8P3 1242 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 NDUFA10O95299 355 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 GRM4Q14833 912 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ZNF667Q5HYK9 610 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 ACRBPQ8NEB7 543 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 LRRC8CQ8TDW0 803 aa17.51■□□□□ 0.39
PCDHA12-201ENST00000398631 CASQ2O14958 399 aaPredicted RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ALKBH5Q6P6C2 394 aaKnown RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 SCARA5Q6ZMJ2 495 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 CAPS2Q9BXY5 557 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 CHD1O14646 1710 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 FTCDO95954 541 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ORC2Q13416 577 aaPredicted RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 KRT31Q15323 416 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 MAPK6Q16659 721 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 FAM84BQ96KN1 310 aaPredicted RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 KIAA1586Q9HCI6 787 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GNAT1P11488 350 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GPSM2P81274 684 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 SPZ1Q9BXG8 430 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 EPB41L5Q9HCM4 733 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PHLPP2Q6ZVD8 1323 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ARHGAP42A6NI28 874 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 GPC4O75487 556 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 ANXA13P27216 316 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PLTPP55058 493 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 SNX1Q13596 522 aa17.5■□□□□ 0.39
PCDHA12-201ENST00000398631 PANX2Q96RD6 677 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms