RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PIK3C2AO00443 1686 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 DDTLA6NHG4 134 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 GNA14O95837 355 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 APBA3O96018 575 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 CYP11B2P19099 503 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 FKBP3Q00688 224 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 KCNH2Q12809 1159 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ALKBH5Q6P6C2 394 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 SPATA4Q8NEY3 305 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 CEP63Q96MT8 703 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 LCMT1Q9UIC8 334 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 PLAAQ9Y263 795 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 SIK3Q9Y2K2 1263 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 RABGAP1Q9Y3P9 1069 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ECM1Q16610 540 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 HNRNPLLQ8WVV9 542 aaKnown RBP5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ARL8AQ96BM9 186 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 HOOK2Q96ED9 719 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 E7EVH7 732 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ALAS1P13196 640 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 LRRC63Q05C16 580 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 SEPT6Q14141 434 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ZIM3Q96PE6 472 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 ERGIC2Q96RQ1 377 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 IKZF4Q9H2S9 585 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 MED4Q9NPJ6 270 aa5.39□□□□□ -1.55
SMAD4-202ENST00000398417 RASSF10A6NK89 507 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 GH2P01242 217 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 TRIM49P0CI25 452 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 TRIM49CP0CI26 452 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 BMP3P12645 472 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 KCNMA1Q12791 1236 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 FBXW10Q5XX13 1052 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 GLYCTKQ8IVS8 523 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 BANK1Q8NDB2 785 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 K7ENM7 598 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CTNNA1P35221 906 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 PDIA5Q14554 519 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 MICALCLQ6ZW33 695 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SLFN12Q8IYM2 578 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 ANKS1AQ92625 1134 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 MTMR8Q96EF0 704 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC17Q96LX7 622 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 NUCKS1Q9H1E3 243 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SWAP70Q9UH65 585 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CHORDC1Q9UHD1 332 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SNX24Q9Y343 169 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 PSMC6P62333 389 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 EP400NLQ6ZTU2 488 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CASKIN2Q8WXE0 1202 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 BICD1Q96G01 975 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 TRIM51Q9BSJ1 452 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 TEKT3Q9BXF9 490 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 RSPH10B2B2RC85 870 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 ZNF263O14978 683 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 PPP1R11O60927 126 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 RSPH10BP0C881 870 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 FXR2P51116 673 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 MYL7Q01449 175 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 MEA1Q16626 185 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 ZC2HC1CQ53FD0 456 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CCDC25Q86WR0 208 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 REEP2Q9BRK0 252 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 NYAP2Q9P242 653 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 AMFRQ9UKV5 643 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 GOLGA6L7A0A1B0GV03 622 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 ZSCAN5CA6NGD5 496 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 GCFC2P16383 781 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 FERP16591 822 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SHMT1P34896 483 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 VPS72Q15906 364 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 GPATCH4Q5T3I0 446 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 FAM102BQ5T8I3 360 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 TSEN2Q8NCE0 465 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 MRRFQ96E11 262 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SCAF8Q9UPN6 1271 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 COL1A1P02452 1464 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 F5H6K3 240 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 GYS1P13807 737 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 INPP5BP32019 993 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 PSMC2P35998 433 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CASP4P49662 377 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 KLRC3Q07444 240 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SHROOM1Q2M3G4 852 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 OTUD6BQ8N6M0 293 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 NID2Q14112 1375 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 RAD51CO43502 376 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 FOSP01100 380 aaPredicted RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 XRCC5P13010 732 aaKnown RBP5.38□□□□□ -1.55
SMAD4-202ENST00000398417 TMEM119Q4V9L6 283 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 KLHDC7AQ5VTJ3 777 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 SP8Q8IXZ3 490 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 CERS5Q8N5B7 392 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 DCAF4Q8WV16 495 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 ELMO3Q96BJ8 720 aa5.38□□□□□ -1.55
SMAD4-202ENST00000398417 LRRC45Q96CN5 670 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms