RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 CCDC155Q8N6L0 562 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 SECISBP2LQ93073 1101 aaKnown RBP18.52■□□□□ 0.55
NUP50-202ENST00000396096 RUSC1Q9BVN2 902 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 IFIH1Q9BYX4 1025 aaKnown RBP18.52■□□□□ 0.55
NUP50-202ENST00000396096 ZHX3Q9H4I2 956 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.55
NUP50-202ENST00000396096 RBAK-RBAKDNI3L0D1 243 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 CALUO43852 315 aaPredicted RBP18.51■□□□□ 0.55
NUP50-202ENST00000396096 SEC31AO94979 1220 aaKnown RBP18.51■□□□□ 0.55
NUP50-202ENST00000396096 ASNSP08243 561 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 NR2F2P24468 414 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 PTGER2P43116 358 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 PRELPP51888 382 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 CYP4A11Q02928 519 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 CEP55Q53EZ4 464 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 RINT1Q6NUQ1 792 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 TXLNBQ8N3L3 684 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
NUP50-202ENST00000396096 LSM14BQ9BX40 385 aaKnown RBP18.51■□□□□ 0.55
NUP50-202ENST00000396096 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
NUP50-202ENST00000396096 AKR1B10O60218 316 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 TBCAO75347 108 aaKnown RBP18.5■□□□□ 0.55
NUP50-202ENST00000396096 SLITRK3O94933 977 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 TFRCP02786 760 aaKnown RBP18.5■□□□□ 0.55
NUP50-202ENST00000396096 PLA2G4AP47712 749 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 SETQ01105 290 aaPredicted RBP18.5■□□□□ 0.55
NUP50-202ENST00000396096 LDHDQ86WU2 507 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 TRIM58Q8NG06 486 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 WDR11Q9BZH6 1224 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 DEF6Q9H4E7 631 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 RGL1Q9NZL6 768 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 SLC16A3O15427 465 aaKnown RBP18.5■□□□□ 0.55
NUP50-202ENST00000396096 SERPING1P05155 500 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 MYBP10242 640 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 CXCL9Q07325 125 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 SFMBT2Q5VUG0 894 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 B3GNT9Q6UX72 402 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 MIGA2Q7L4E1 593 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 UBXN6Q9BZV1 441 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 GANQ9H2C0 597 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 HDAC6Q9UBN7 1215 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 DUSP10Q9Y6W6 482 aa18.5■□□□□ 0.55
NUP50-202ENST00000396096 RSPH10B2B2RC85 870 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 WNT10BO00744 389 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 ENC1O14682 589 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 EIF3DO15371 548 aaKnown RBP eCLIP18.49■□□□□ 0.55
NUP50-202ENST00000396096 RSPH10BP0C881 870 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 ERCC3P19447 782 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 HSD17B4P51659 736 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 GHRHRQ02643 423 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 CKAP4Q07065 602 aaKnown RBP18.49■□□□□ 0.55
NUP50-202ENST00000396096 KCNH2Q12809 1159 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 NFIL3Q16649 462 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 UTP14CQ5TAP6 766 aaKnown RBP18.49■□□□□ 0.55
NUP50-202ENST00000396096 POTEAQ6S8J7 498 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 C1orf186Q6ZWK4 172 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 DYDC2Q96IM9 177 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.49■□□□□ 0.55
NUP50-202ENST00000396096 FER1L6Q2WGJ9 1857 aa18.49■□□□□ 0.55
NUP50-202ENST00000396096 TLR2O60603 784 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 GAS7O60861 476 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 TACC1O75410 805 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 ICAM1P05362 532 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 DMTNQ08495 405 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 CTTNQ14247 550 aaKnown RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 SLC9C1Q4G0N8 1177 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 PNKPQ96T60 521 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 FUT8Q9BYC5 575 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 GLIS2Q9BZE0 524 aaPredicted RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 METTL14Q9HCE5 456 aaKnown RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 PLCB1Q9NQ66 1216 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 PRDM10Q9NQV6 1147 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 AIPL1Q9NZN9 384 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 KCND2Q9NZV8 630 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 ARMCX3Q9UH62 379 aaPredicted RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 JRKLQ9Y4A0 524 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 ASTN1O14525 1302 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 FRMPD4Q14CM0 1322 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 RPTORQ8N122 1335 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 MACROD2A1Z1Q3 448 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 PHF20L1A8MW92 1017 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 SASH3O75995 380 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 PRPF6O94906 941 aaKnown RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 PRLRP16471 622 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 RPL13P26373 211 aaKnown RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 MAGEA1P43355 309 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 EPHA7Q15375 998 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 ZYXQ15942 572 aaKnown RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 LONRF2Q1L5Z9 754 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 DPY19L2P1Q6NXN4 242 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 NOA1Q8NC60 698 aaKnown RBP18.48■□□□□ 0.55
NUP50-202ENST00000396096 NLRC4Q9NPP4 1024 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 GINM1Q9NU53 330 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 FBXO28Q9NVF7 368 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 SEL1LQ9UBV2 794 aa18.48■□□□□ 0.55
NUP50-202ENST00000396096 UBE4BO95155 1302 aa18.47■□□□□ 0.55
NUP50-202ENST00000396096 ERLIN1O75477 346 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms