RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 CCDC105Q8IYK2 499 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 ANKS4BQ8N8V4 417 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 PSD3Q9NYI0 1048 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 COL14A1Q05707 1796 aaKnown RBP14.44□□□□□ -0.1
NFKB1-202ENST00000394820 PSMD14O00487 310 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 MYBL1P10243 752 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 GKAP1Q5VSY0 366 aaPredicted RBP14.44□□□□□ -0.1
NFKB1-202ENST00000394820 GDAP1Q8TB36 358 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 TRIM51Q9BSJ1 452 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 ARMCX3Q9UH62 379 aaPredicted RBP14.44□□□□□ -0.1
NFKB1-202ENST00000394820 RAD51CO43502 376 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 SPOPO43791 374 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 SRGNP10124 158 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 NLRP14Q86W24 1093 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 LRRC45Q96CN5 670 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 FBXL5Q9UKA1 691 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 MYH13Q9UKX3 1938 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 MYMKA6NI61 221 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L10C9JJH3 530 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 RGS16O15492 202 aaPredicted RBP14.43□□□□□ -0.1
NFKB1-202ENST00000394820 FGGP02679 453 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 HLA-DOAP06340 250 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 TNFAIP3P21580 790 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 NFIAQ12857 509 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 HP1BP3Q5SSJ5 553 aaPredicted RBP14.43□□□□□ -0.1
NFKB1-202ENST00000394820 ZNF746Q6NUN9 644 aaPredicted RBP14.43□□□□□ -0.1
NFKB1-202ENST00000394820 ALKBH5Q6P6C2 394 aaKnown RBP14.43□□□□□ -0.1
NFKB1-202ENST00000394820 GJB7Q6PEY0 223 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 SH3RF1Q7Z6J0 888 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 CCDC50Q8IVM0 306 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 TPH2Q8IWU9 490 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 CCDC26Q8TAB7 109 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 SESN3P58005 492 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 NEDD1Q8NHV4 660 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 KCNV2Q8TDN2 545 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 DDR1Q08345 913 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 MESDQ14696 234 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 ARL6IP4Q66PJ3 421 aaKnown RBP14.43□□□□□ -0.1
NFKB1-202ENST00000394820 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
NFKB1-202ENST00000394820 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
NFKB1-202ENST00000394820 A0A087X0T9 212 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 POTEB3A0JP26 581 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 PALM3A6NDB9 673 aaPredicted RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 POTECB2RU33 542 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 FAM13AO94988 1023 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 FAM228BP0C875 321 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 FKBP3Q00688 224 aaKnown RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 NAALADL2Q58DX5 795 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 POTEBQ6S5H4 581 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 IRF2BP1Q8IU81 584 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 MYCT1Q8N699 235 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 ZNF473Q8WTR7 871 aaKnown RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 PPP1R12CQ9BZL4 782 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 KCND1Q9NSA2 647 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 ASIC3Q9UHC3 531 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 DDX25Q9UHL0 483 aaKnown RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 CICQ96RK0 1608 aaPredicted RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 SORBS3O60504 671 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 PPP1R37O75864 691 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 FGRP09769 529 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 H2AFZP0C0S5 128 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 XRCC5P13010 732 aaKnown RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 EEF2P13639 858 aaKnown RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 GUCY2CP25092 1073 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 RUFY4Q6ZNE9 571 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 H2AFVQ71UI9 128 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 SH2D4AQ9H788 454 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 TMOD4Q9NZQ9 345 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 SCAF8Q9UPN6 1271 aaKnown RBP14.42□□□□□ -0.1
NFKB1-202ENST00000394820 COL4A3BPQ9Y5P4 624 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 TTI1O43156 1089 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 SLC37A4O43826 429 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 BBOX1O75936 387 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 SLC9A1P19634 815 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 PLCB3Q01970 1234 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 MTM1Q13496 603 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 EXOC3L4Q17RC7 722 aa14.42□□□□□ -0.1
NFKB1-202ENST00000394820 ACSL3O95573 720 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 IFI16Q16666 785 aaKnown RBP14.41□□□□□ -0.1
NFKB1-202ENST00000394820 ZFPM1Q8IX07 1006 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 PIGOQ8TEQ8 1089 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 FAM167BQ9BTA0 163 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 PCIF1Q9H4Z3 704 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 GPR75-ASB3A0A0A6YYF3 556 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 MEFVO15553 781 aaPredicted RBP14.41□□□□□ -0.1
NFKB1-202ENST00000394820 PDHBP11177 359 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 SNCBQ16143 134 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 TTI2Q6NXR4 508 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 WDR93Q6P2C0 686 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 C16orf86Q6ZW13 317 aa14.41□□□□□ -0.1
NFKB1-202ENST00000394820 NUDT12Q9BQG2 462 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms