RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PTX3P26022 381 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-205ENST00000391970 LSP1P33241 339 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 PDE6BP35913 854 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 HERVK_113P62684 666 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 YBX1P67809 324 aaKnown RBP4.25□□□□□ -1.73
PTPRC-205ENST00000391970 GRIN1Q05586 938 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 TMEM62Q0P6H9 643 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 LRRC32Q14392 662 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 TMEM132BQ14DG7 1078 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 TTF1Q15361 905 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-205ENST00000391970 EPHA7Q15375 998 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 PAN2Q504Q3 1202 aaKnown RBP4.25□□□□□ -1.73
PTPRC-205ENST00000391970 ZC3H14Q6PJT7 736 aaKnown RBP4.25□□□□□ -1.73
PTPRC-205ENST00000391970 RASSF3Q86WH2 238 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 ZSWIM9Q86XI8 627 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 FAM126BQ8IXS8 530 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 ZZZ3Q8IYH5 903 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 ZNF610Q8N9Z0 462 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 SMAD5Q99717 465 aaKnown RBP4.25□□□□□ -1.73
PTPRC-205ENST00000391970 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-205ENST00000391970 HRKO00198 91 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 BIN1O00499 593 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 ABLIM1O14639 778 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 MARCH6O60337 910 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 PAPLNO95428 1278 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 PARNO95453 639 aaKnown RBP4.24□□□□□ -1.73
PTPRC-205ENST00000391970 MMEP08473 750 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 FAHP16930 419 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 CD40P25942 277 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 NEK2P51955 445 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 EPHB1P54762 984 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 MCL1Q07820 350 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 KCNMB1Q16558 191 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 INAVAQ3KP66 663 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 CBARPQ8N350 705 aaPredicted RBP4.24□□□□□ -1.73
PTPRC-205ENST00000391970 AHCYL2Q96HN2 611 aaKnown RBP4.24□□□□□ -1.73
PTPRC-205ENST00000391970 C16orf92Q96LL3 132 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 MS4A5Q9H3V2 200 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 BCAS3Q9H6U6 928 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 DTLQ9NZJ0 730 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 HSPBP1Q9NZL4 362 aa4.24□□□□□ -1.73
PTPRC-205ENST00000391970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 KDM1AO60341 852 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 FBXO21O94952 628 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 LRG1P02750 347 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ITGB5P18084 799 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 AOAHP28039 575 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 IARSP41252 1262 aaKnown RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 KLF1Q13351 362 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ABCB5Q2M3G0 1257 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 RGL3Q3MIN7 710 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 OLFML2BQ68BL8 750 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ETV3LQ6ZN32 361 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 TMC6Q7Z403 805 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 RTN4RL1Q86UN2 441 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 AMIGO3Q86WK7 504 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 NME9Q86XW9 330 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 RAVER1Q8IY67 606 aaKnown RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ASB15Q8WXK1 588 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ALG3Q92685 438 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 TOE1Q96GM8 510 aaKnown RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 YIPF4Q9BSR8 244 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ZDHHC5Q9C0B5 715 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 TOPORSQ9NS56 1045 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 C14orf119Q9NWQ9 140 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 BTBD7Q9P203 1132 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 USP36Q9P275 1121 aaKnown RBP4.23□□□□□ -1.73
PTPRC-205ENST00000391970 PLA2G2DQ9UNK4 145 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 SPEF1Q9Y4P9 236 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 ASB1Q9Y576 335 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 EID1Q9Y6B2 187 aa4.23□□□□□ -1.73
PTPRC-205ENST00000391970 TNKSO95271 1327 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 WASHC2AQ641Q2 1341 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 LCHNA4D1U4 455 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 TMEM253P0C7T8 217 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 FBLN1P23142 703 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 VIPR1P32241 457 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 THBS2P35442 1172 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 STAT5AP42229 794 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 ZNF200P98182 395 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-205ENST00000391970 ADCY1Q08828 1119 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 DBPQ10586 325 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-205ENST00000391970 PDCD1Q15116 288 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 CD276Q5ZPR3 534 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 TEPPQ6URK8 271 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 FRMD7Q6ZUT3 714 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 ZBTB46Q86UZ6 589 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 CILP2Q8IUL8 1156 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 CPA5Q8WXQ8 436 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 RTF1Q92541 710 aaKnown RBP4.22□□□□□ -1.73
PTPRC-205ENST00000391970 CHMP4CQ96CF2 233 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 FOXRED1Q96CU9 486 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-205ENST00000391970 GBP4Q96PP9 640 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 ZNF552Q9H707 407 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-205ENST00000391970 CHPF2Q9P2E5 772 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 MSRAQ9UJ68 235 aa4.22□□□□□ -1.73
PTPRC-205ENST00000391970 NOC2LQ9Y3T9 749 aaKnown RBP4.22□□□□□ -1.73
PTPRC-205ENST00000391970 SHTN1A0MZ66 631 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 ZNF503-AS2A6NEH8 195 aa4.21□□□□□ -1.74
PTPRC-205ENST00000391970 GOLGA6L22H0YM25 854 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms