RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 JAM2P57087 298 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 GABREP78334 506 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 DBPQ10586 325 aaPredicted RBP5.26□□□□□ -1.57
TRAV40-201ENST00000390467 FIGNQ5HY92 759 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 BTBD8Q5XKL5 378 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 Q6ZUG5 572 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 PLEKHH3Q7Z736 793 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 OSTM1Q86WC4 334 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 TTC9BQ8N6N2 239 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 DNAJC7Q99615 494 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 NDOR1Q9UHB4 597 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 PTPN22Q9Y2R2 807 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 ZDHHC9Q9Y397 364 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 CCDC66A2RUB6 948 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 B4GALT4O60513 344 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 RASGRP1O95267 797 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 CNOT4O95628 575 aaKnown RBP5.25□□□□□ -1.57
TRAV40-201ENST00000390467 CHGBP05060 677 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 ENO2P09104 434 aaPredicted RBP5.25□□□□□ -1.57
TRAV40-201ENST00000390467 CSF2RBP32927 897 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 ICAM4Q14773 271 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 SEC23AQ15436 765 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 LONRF2Q1L5Z9 754 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 GLB1LQ6UWU2 654 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 CISD2Q8N5K1 135 aaKnown RBP5.25□□□□□ -1.57
TRAV40-201ENST00000390467 GSTCDQ8NEC7 633 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 BARX1Q9HBU1 254 aaPredicted RBP5.25□□□□□ -1.57
TRAV40-201ENST00000390467 RIC8BQ9NVN3 520 aa5.25□□□□□ -1.57
TRAV40-201ENST00000390467 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 ZNF888P0CJ79 500 aaPredicted RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 MC4RP32245 332 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 PPP2CBP62714 309 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 PPP2CAP67775 309 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 PUM1Q14671 1186 aaKnown RBP eCLIP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 CDSNQ15517 529 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 SURF1Q15526 300 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 ZXDCQ2QGD7 858 aaPredicted RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 ARHGEF18Q6ZSZ5 1173 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 C16orf59Q7L2K0 433 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 LRP10Q7Z4F1 713 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 RALYLQ86SE5 291 aaKnown RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 ZC3H7AQ8IWR0 971 aaKnown RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 SCLYQ96I15 445 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 AJUBAQ96IF1 538 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 IPO9Q96P70 1041 aaKnown RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 SRPK1Q96SB4 655 aaKnown RBP5.24□□□□□ -1.57
TRAV40-201ENST00000390467 GPR20Q99678 358 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 C1QTNF3Q9BXJ4 246 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 CD248Q9HCU0 757 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 ATP23Q9Y6H3 246 aa5.24□□□□□ -1.57
TRAV40-201ENST00000390467 H0Y858 1186 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 C4BPAP04003 597 aaKnown RBP5.23□□□□□ -1.57
TRAV40-201ENST00000390467 AOAHP28039 575 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 DNM2P50570 870 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 CPZQ66K79 652 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 NOSTRINQ8IVI9 506 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 NLGN4XQ8N0W4 816 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 JMYQ8N9B5 988 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 DNERQ8NFT8 737 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 PMFBP1Q8TBY8 1022 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 BORCS6Q96GS4 357 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 KATNBL1Q9H079 304 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 BTBD7Q9P203 1132 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 COQ6Q9Y2Z9 468 aa5.23□□□□□ -1.57
TRAV40-201ENST00000390467 NPEPPSL1A6NEC2 478 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 PRAMEF25A6NGN4 478 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 MPIG6BO95866 241 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 TNFRSF1AP19438 455 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 ST5P78524 1137 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 IL13RA1P78552 427 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 TRIM61Q5EBN2 209 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 CIR1Q86X95 450 aaPredicted RBP5.22□□□□□ -1.57
TRAV40-201ENST00000390467 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 JADE2Q9NQC1 790 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 ARHGAP28Q9P2N2 729 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 MYRFQ9Y2G1 1151 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 SLC4A7Q9Y6M7 1214 aa5.22□□□□□ -1.57
TRAV40-201ENST00000390467 C1QTNF3-AMACRE9PGA6 284 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 MATN3O15232 486 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 MMEP08473 750 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 NAT1P18440 290 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 PTGS1P23219 599 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 GJA4P35212 333 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 LACTBP83111 547 aaPredicted RBP5.21□□□□□ -1.58
TRAV40-201ENST00000390467 TOP3AQ13472 1001 aaPredicted RBP5.21□□□□□ -1.58
TRAV40-201ENST00000390467 CRY1Q16526 586 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 FAM47CQ5HY64 1035 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 SLFN13Q68D06 897 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 ABHD17CQ6PCB6 329 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 LRSAM1Q6UWE0 723 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 BRAPQ7Z569 592 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 FGD2Q7Z6J4 655 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 REXO1L1PQ8IX06 675 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 LILRB2Q8N423 598 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 CHST13Q8NET6 341 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 DVL3Q92997 716 aaPredicted RBP5.21□□□□□ -1.58
TRAV40-201ENST00000390467 GNRHR2Q96P88 292 aa5.21□□□□□ -1.58
TRAV40-201ENST00000390467 DNAJC2Q99543 621 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms