RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 SLC29A2Q14542 456 aa16.61■□□□□ 0.25
SRPK1-204ENST00000373825 PROSER3Q2NL68 480 aa16.61■□□□□ 0.25
SRPK1-204ENST00000373825 TRAPPC3O43617 180 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 P3H1Q32P28 736 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 PALM2Q8IXS6 379 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.255e-6■□□□□ 9.6
SRPK1-204ENST00000373825 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 QPCTQ16769 361 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 FAXDC2Q96IV6 333 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 SPATA17Q96L03 361 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 NDEL1Q9GZM8 345 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 CYP4F11Q9HBI6 524 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 ANAPC5Q9UJX4 755 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 MCF2LO15068 1137 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 KRT10P13645 584 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 ADAM9Q13443 819 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 TMEM237Q96Q45 408 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 NDNQ99608 321 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 HNRNPRO43390 633 aaKnown RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 GSTA1P08263 222 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 PLCG2P16885 1265 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 PSMD7P51665 324 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 PRR16Q569H4 304 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 NR1H4Q96RI1 486 aaPredicted RBP16.6■□□□□ 0.25
SRPK1-204ENST00000373825 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.257e-10■□□□□ 9.1
SRPK1-204ENST00000373825 TRIM55Q9BYV6 548 aa16.6■□□□□ 0.25
SRPK1-204ENST00000373825 NPATQ14207 1427 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 KDSRQ06136 332 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 TXNDC16Q9P2K2 825 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 RTN3O95197 1032 aaPredicted RBP16.59■□□□□ 0.25
SRPK1-204ENST00000373825 EXOC3L4Q17RC7 722 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 KIAA2013Q8IYS2 634 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 TTC17Q96AE7 1141 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 MPP4Q96JB8 637 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 UBN1Q9NPG3 1134 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 TYW1Q9NV66 732 aaKnown RBP16.59■□□□□ 0.25
SRPK1-204ENST00000373825 INTS13Q9NVM9 706 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 NUB1Q9Y5A7 615 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 GFPT2O94808 682 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
SRPK1-204ENST00000373825 GHRP10912 638 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 ACADSP16219 412 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 COPB2P35606 906 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 HERVK_113P62684 666 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 THOC5Q13769 683 aaKnown RBP16.59■□□□□ 0.25
SRPK1-204ENST00000373825 SGO2Q562F6 1265 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.59■□□□□ 0.25
SRPK1-204ENST00000373825 TCHHQ07283 1943 aa16.59■□□□□ 0.25
SRPK1-204ENST00000373825 KRT5P13647 590 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 DNAJC3Q13217 504 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 WDR75Q8IWA0 830 aaKnown RBP16.58■□□□□ 0.25
SRPK1-204ENST00000373825 NLRP7Q8WX94 980 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 OSBPL7Q9BZF2 842 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 CFLARO15519 480 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 LRRC24Q50LG9 513 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 SNX30Q5VWJ9 437 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 FAM129AQ9BZQ8 928 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 NPHS2Q9NP85 383 aa16.58■□□□□ 0.25
SRPK1-204ENST00000373825 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.25
SRPK1-204ENST00000373825 GMNNO75496 209 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 MSL3Q8N5Y2 521 aaKnown RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 SREK1Q8WXA9 508 aaKnown RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 THAP11Q96EK4 314 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 LRGUKQ96M69 825 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 TRIM56Q9BRZ2 755 aaKnown RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 TRIM33Q9UPN9 1127 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 A0A0G2JLW4 131 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 AGTP01019 485 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 GNAQP50148 359 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 CAVIN4Q5BKX8 364 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 DRC3Q9H069 523 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 PUS7LQ9H0K6 701 aaKnown RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 ISCUQ9H1K1 167 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 ZNF148Q9UQR1 794 aa16.58■□□□□ 0.24
SRPK1-204ENST00000373825 CTDP1Q9Y5B0 961 aaPredicted RBP16.58■□□□□ 0.24
SRPK1-204ENST00000373825 FAM13AO94988 1023 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 KITP10721 976 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 KAZNQ674X7 775 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 CRELD2Q6UXH1 353 aaPredicted RBP16.57■□□□□ 0.24
SRPK1-204ENST00000373825 NUDCD3Q8IVD9 361 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 ICA1LQ8NDH6 482 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 WDR60Q8WVS4 1066 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 RUBCNQ92622 972 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 TUBB6Q9BUF5 446 aa16.57■□□□□ 0.24
SRPK1-204ENST00000373825 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
SRPK1-204ENST00000373825 TNKSO95271 1327 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms