RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 KIF13BQ9NQT8 1826 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 POTEB2H3BUK9 544 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 ATP8B1O43520 1251 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 EYA4O95677 639 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 POLD1P28340 1107 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 KNOP1Q1ED39 458 aaKnown RBP20.66■□□□□ 0.9
USP49-202ENST00000373010 LRCH2Q5VUJ6 765 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 PPP4R3CPQ6ZMV5 832 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 OTOP1Q7RTM1 612 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 DYDC2Q96IM9 177 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 FUT8Q9BYC5 575 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 SH2D4AQ9H788 454 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 CAPN6Q9Y6Q1 641 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 SFI1A8K8P3 1242 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 ZBTB39O15060 712 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 TLR2O60603 784 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 USO1O60763 962 aaKnown RBP20.65■□□□□ 0.9
USP49-202ENST00000373010 CAP2P40123 477 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 GFPT1Q06210 699 aaPredicted RBP20.65■□□□□ 0.9
USP49-202ENST00000373010 TRAF1Q13077 416 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 TPH2Q8IWU9 490 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 HSD17B14Q9BPX1 270 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 ZNF185O15231 689 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 PSMD10O75832 226 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 MOCS3O95396 460 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 MYH10P35580 1976 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 ASTE1Q2TB18 679 aaPredicted RBP20.65■□□□□ 0.9
USP49-202ENST00000373010 TDRD12Q587J7 1177 aaKnown RBP20.65■□□□□ 0.9
USP49-202ENST00000373010 TRAF3IP3Q9Y228 551 aa20.65■□□□□ 0.9
USP49-202ENST00000373010 TBCAO75347 108 aaKnown RBP20.64■□□□□ 0.89
USP49-202ENST00000373010 SLITRK3O94933 977 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 MAGEA1P43355 309 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 VSNL1P62760 191 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 TUBB4BP68371 445 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 KCNH2Q12809 1159 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 NBPF9Q3BBW0 867 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 SFMBT2Q5VUG0 894 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 RINT1Q6NUQ1 792 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 RNF216Q9NWF9 866 aaPredicted RBP20.64■□□□□ 0.89
USP49-202ENST00000373010 FAM184BQ9ULE4 1060 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 MRPL11Q9Y3B7 192 aaKnown RBP20.64■□□□□ 0.89
USP49-202ENST00000373010 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 SHTN1A0MZ66 631 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 TBC1D12O60347 775 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 KCNA1Q09470 495 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 LDHDQ86WU2 507 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 ANKRD13CQ8N6S4 541 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 SLC5A5Q92911 643 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 ZNRF3Q9ULT6 936 aa20.64■□□□□ 0.89
USP49-202ENST00000373010 ANO9A1A5B4 782 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 GCNT3O95395 438 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 EPS15P42566 896 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
USP49-202ENST00000373010 NIM1KQ8IY84 436 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 JADE2Q9NQC1 790 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 RBBP6Q7Z6E9 1792 aaKnown RBP20.63■□□□□ 0.89
USP49-202ENST00000373010 ARP10275 920 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 FKBP1CQ5VVH2 108 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 ABCB6Q9NP58 842 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 PGAP2Q9UHJ9 254 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 SALL4Q9UJQ4 1053 aa20.63■□□□□ 0.89
USP49-202ENST00000373010 ASTN1O14525 1302 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 GAS7O60861 476 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 TACC1O75410 805 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 CXCL9Q07325 125 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 PPP2R5CQ13362 524 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 CEP55Q53EZ4 464 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 BEND6Q5SZJ8 279 aaPredicted RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 UTP14CQ5TAP6 766 aaKnown RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 FAM160B2Q86V87 743 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 GANQ9H2C0 597 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 IKZF4Q9H2S9 585 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 TUFT1Q9NNX1 390 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 ARMCX3Q9UH62 379 aaPredicted RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 SSU72P8A0A1W2PR75 194 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 PDE2AO00408 941 aaPredicted RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 PDXKO00764 312 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 CLIC2O15247 247 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 CALUO43852 315 aaPredicted RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 ACTN1P12814 892 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 PRELPP51888 382 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 RASSF7Q02833 373 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 ARID5AQ03989 594 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 RAPGEF1Q13905 1077 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 TERF2Q15554 542 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 SLC9C1Q4G0N8 1177 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 POTEAQ6S8J7 498 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 FAM83AQ86UY5 434 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 TRIM58Q8NG06 486 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 HNRNPLLQ8WVV9 542 aaKnown RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 AGBL1Q96MI9 1066 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 RGS17Q9UGC6 210 aaPredicted RBP20.62■□□□□ 0.89
USP49-202ENST00000373010 FEM1BQ9UK73 627 aa20.62■□□□□ 0.89
USP49-202ENST00000373010 AKAP3O75969 853 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 SERPING1P05155 500 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 INPP5BP32019 993 aa20.61■□□□□ 0.89
USP49-202ENST00000373010 ENOX2Q16206 610 aaKnown RBP20.61■□□□□ 0.89
USP49-202ENST00000373010 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms