RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 EHD2Q9NZN4 543 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 EXOC7Q9UPT5 735 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 MRC1P22897 1456 aa9.92□□□□□ -0.82
SMARCA1-202ENST00000371122 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 DAPK3O43293 454 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PALMO75781 387 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 AFPP02771 609 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 ATP1A1P05023 1023 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 ACTN1P12814 892 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PDCLQ13371 301 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 NAA25Q14CX7 972 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PSMD6Q15008 389 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 LIN9Q5TKA1 542 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 CLEC4GQ6UXB4 293 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 CNKSR1Q969H4 720 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PCDHA6Q9UN73 950 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PCDHA8Q9Y5H6 950 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 TNS1Q9HBL0 1735 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PNMA6FA0A0J9YX94 578 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 CSF1RP07333 972 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 VEGFAP15692 232 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 YARSP54577 528 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 INTS8Q75QN2 995 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 C7orf31Q8N865 590 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 MS4A14Q96JA4 679 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 DDX47Q9H0S4 455 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 C1orf112Q9NSG2 853 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 ARHGAP4P98171 946 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 EARS2Q5JPH6 523 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 C12orf60Q5U649 245 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 GALNT17Q6IS24 598 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 CYFIP1Q7L576 1253 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 CCDC170Q8IYT3 715 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 NAP1L3Q99457 506 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 ADAM21Q9UKJ8 722 aa9.91□□□□□ -0.82
SMARCA1-202ENST00000371122 WDR91A4D1P6 747 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 CCDC160A6NGH7 325 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 CLTAP09496 248 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 NMT1P30419 496 aaKnown RBP9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 PPM1FP49593 454 aaPredicted RBP9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 SPP2Q13103 211 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 E2F4Q16254 413 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 THNSL1Q8IYQ7 743 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF34Q8IZ26 560 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 SAAL1Q96ER3 474 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 MPHOSPH6Q99547 160 aaKnown RBP9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 SNX24Q9Y343 169 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 UBR2Q8IWV8 1755 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 FRMD3A2A2Y4 597 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 MYO1FO00160 1098 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 ABL1P00519 1130 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 MAP3K9P80192 1104 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 DMP1Q13316 513 aaPredicted RBP9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 VPS72Q15906 364 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 RUFY4Q6ZNE9 571 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 DYDC2Q96IM9 177 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 ABCB11O95342 1321 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 SALL3Q9BXA9 1300 aa9.9□□□□□ -0.82
SMARCA1-202ENST00000371122 LGALS16A8MUM7 142 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 F5H423 210 aaPredicted RBP9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 PCP11498 1178 aaKnown RBP9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 VSNL1P62760 191 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 ENGASEQ8NFI3 743 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 ARHGEF2Q92974 986 aaKnown RBP9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 LBHD1Q9BQE6 289 aaPredicted RBP9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 OSBPL5Q9H0X9 879 aaPredicted RBP9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 PARVGQ9HBI0 331 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 PCDHB4Q9Y5E5 795 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 DUSP10Q9Y6W6 482 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.83
SMARCA1-202ENST00000371122 CEMIPQ8WUJ3 1361 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CCDC151A5D8V7 595 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 SLC16A4O15374 487 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 ACSL3O95573 720 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 GNA14O95837 355 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 FGGP02679 453 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 PLEKP08567 350 aaPredicted RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 STX2P32856 288 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 PSMC2P35998 433 aaKnown RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 ERFP50548 548 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 AFF2P51816 1311 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 HHATQ5VTY9 493 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 PHLPP2Q6ZVD8 1323 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 TBC1D31Q96DN5 1066 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 AK8Q96MA6 479 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 KMT5AQ9NQR1 393 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 NOVA2Q9UNW9 492 aaKnown RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 UTYO14607 1347 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 ZBTB5O15062 677 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 THAP12O43422 761 aa9.89□□□□□ -0.83
SMARCA1-202ENST00000371122 PSMC4P43686 418 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms