RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GANQ9H2C0 597 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ITGB4P16144 1822 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 ARFGEF1Q9Y6D6 1849 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 CHRNA2Q15822 529 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 ZNF571Q7Z3V5 609 aaPredicted RBP12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 PHC3Q8NDX5 983 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 PNMA5Q96PV4 448 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 BATF3Q9NR55 127 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 ARHGEF3Q9NR81 526 aa12.77□□□□□ -0.36
SMARCA1-201ENST00000371121 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 FOXO6A8MYZ6 492 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 GNAZP19086 355 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 ECM1Q16610 540 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 KIAA0753Q2KHM9 967 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 CAPRIN2Q6IMN6 1127 aaKnown RBP12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 ARMC9Q7Z3E5 817 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 SLFN11Q7Z7L1 901 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 PNMA8AQ86V59 439 aaPredicted RBP12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 CCDC63Q8NA47 563 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 CCDC197Q8NCU1 140 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 CABLES1Q8TDN4 633 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
SMARCA1-201ENST00000371121 PLSCR1O15162 318 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 DDAH1O94760 285 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 MMEP08473 750 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 CREB1P16220 341 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 DHX9Q08211 1270 aaKnown RBP12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 GRB10Q13322 594 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ANKRD20A2Q5SQ80 823 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ANKRD20A1Q5TYW2 823 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ANKRD20A3Q5VUR7 823 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 IL17RBQ9NRM6 502 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ETAA1Q9NY74 926 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 PCDHA3Q9Y5H8 950 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ABCB11O95342 1321 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 BTNL10A8MVZ5 291 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 TP73O15350 636 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 SERPING1P05155 500 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 GNAT2P19087 354 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 PTK2Q05397 1052 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 BNIP1Q12981 228 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 LRRC41Q15345 812 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ZNF568Q3ZCX4 644 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ZDHHC14Q8IZN3 488 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 RSRC1Q96IZ7 334 aaKnown RBP12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 PBKQ96KB5 322 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 ASIC1P78348 528 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 SEMA3FQ13275 785 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 FITM2Q8N6M3 262 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 AIPL1Q9NZN9 384 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 CEP72Q9P209 647 aa12.76□□□□□ -0.37
SMARCA1-201ENST00000371121 DPPA5A6NC42 116 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 SNX3O60493 162 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 KRT71Q3SY84 523 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 ANO7Q6IWH7 933 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 CABP7Q86V35 215 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 A0A1B0GVG6 124 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 NUDT17P0C025 328 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 FAM114A1Q8IWE2 563 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 CCDC47Q96A33 483 aaKnown RBP12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 ATP8A1Q9Y2Q0 1164 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 RNASELQ05823 741 aaKnown RBP12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 RUFY4Q6ZNE9 571 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 RMDN2Q96LZ7 410 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 PRKAG3Q9UGI9 489 aa12.75□□□□□ -0.37
SMARCA1-201ENST00000371121 CYP2D6P10635 497 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 PECAM1P16284 738 aaPredicted RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 PRPHP41219 470 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 ODF2Q5BJF6 829 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 IQCDQ96DY2 449 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 CALR3Q96L12 384 aaKnown RBP12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.74□□□□□ -0.378e-8■□□□□ 10.9
SMARCA1-201ENST00000371121 FAM167BQ9BTA0 163 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 DPH5Q9H2P9 285 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
SMARCA1-201ENST00000371121 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms