RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 NT5DC1Q5TFE4 455 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 OTUD6AQ7L8S5 288 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 DAGLBQ8NCG7 672 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 EIF2AK1Q9BQI3 630 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 KBTBD4Q9NVX7 518 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 DUSP10Q9Y6W6 482 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 TRIM49P0CI25 452 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 TRIM49CP0CI26 452 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 RXRBP28702 533 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 LIG4P49917 911 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 USP11P51784 963 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 DMP1Q13316 513 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 FAM20AQ96MK3 541 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 CEP63Q96MT8 703 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 NFU1Q9UMS0 254 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 A0A0U1RQJ8 604 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 LRRIQ4A6NIV6 560 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 TTI2Q6NXR4 508 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 PDXDC1Q6P996 788 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 TRIM65Q6PJ69 517 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 PPP4R3CPQ6ZMV5 832 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 BCAS4Q8TDM0 211 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 OSBPL9Q96SU4 736 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 SUGT1Q9Y2Z0 365 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 HGSO14964 777 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 DKC1O60832 514 aaKnown RBP eCLIP9.22□□□□□ -0.939e-7■■■■■ 28.8
PTPRK-206ENST00000368215 BAG6P46379 1132 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 PEX3P56589 373 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 DEPTORQ8TB45 409 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 GLG1Q92896 1179 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 CEP170P1Q96L14 293 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 IWS1Q96ST2 819 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 MPHOSPH6Q99547 160 aaKnown RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 ANKFY1Q9P2R3 1169 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 SEPT9Q9UHD8 586 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 ATF5Q9Y2D1 282 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 FAM237AA0A1B0GTK4 181 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 KIF4AO95239 1232 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 CD19P15391 556 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 EPHB4P54760 987 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 NAALADL2Q58DX5 795 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 HHIPL2Q6UWX4 724 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 ANKRD35Q8N283 1001 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 REEP2Q9BRK0 252 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 DDX4Q9NQI0 724 aaKnown RBP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 DNAJC12Q9UKB3 198 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRK-206ENST00000368215 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
PTPRK-206ENST00000368215 LMNB1P20700 586 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 ACTN2P35609 894 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 MNAT1P51948 309 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 TRPC3Q13507 836 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 SLC30A10Q6XR72 485 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 CCDC121Q6ZUS5 278 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 ZNF365Q70YC5 407 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 CAPS2Q9BXY5 557 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 CEP83Q9Y592 693 aa9.21□□□□□ -0.93
PTPRK-206ENST00000368215 ANO9A1A5B4 782 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 ANKRD65E5RJM6 399 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 E7EVH7 732 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 PGRMC1O00264 195 aaKnown RBP9.21□□□□□ -0.94
PTPRK-206ENST00000368215 ASNSP08243 561 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 VIMP08670 466 aaKnown RBP9.21□□□□□ -0.94
PTPRK-206ENST00000368215 KRT19P08727 400 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 GCLMP48507 274 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 PRELPP51888 382 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 USP14P54578 494 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 FUT2Q10981 343 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 SLC51AQ86UW1 340 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 ACCSQ96QU6 501 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 PTPN22Q9Y2R2 807 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 ATRNO75882 1429 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 MYBP10242 640 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 MXI1P50539 228 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 E2F4Q16254 413 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 IL17AQ16552 155 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 GNPTABQ3T906 1256 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 PADI6Q6TGC4 694 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 RUFY4Q6ZNE9 571 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 KSR1Q8IVT5 923 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 MS4A14Q96JA4 679 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 NUDT12Q9BQG2 462 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 CCDC77Q9BR77 488 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 STIM2Q9P246 746 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 PRR12Q9ULL5 1215 aa9.21□□□□□ -0.94
PTPRK-206ENST00000368215 ESYT2A0FGR8 921 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 DDTLA6NHG4 134 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 IPO5O00410 1097 aaKnown RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.945e-7■■□□□ 12
PTPRK-206ENST00000368215 PDE6CP51160 858 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 HNRNPH2P55795 449 aaKnown RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 TBX2Q13207 712 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-206ENST00000368215 LIN9Q5TKA1 542 aa9.2□□□□□ -0.94
PTPRK-206ENST00000368215 DCUN1D2Q6PH85 259 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms