RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SNX1Q13596 522 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 CUL1Q13616 776 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 RNF10Q8N5U6 811 aaKnown RBP12.68□□□□□ -0.38
COPA-202ENST00000368069 TMEM60Q9H2L4 133 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 KLHL14Q9P2G3 628 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 GINS2Q9Y248 185 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 H0YCG3 227 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 CLNS1AP54105 237 aaKnown RBP12.68□□□□□ -0.38
COPA-202ENST00000368069 NCAPHQ15003 741 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 KAZNQ674X7 775 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
COPA-202ENST00000368069 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.68□□□□□ -0.38
COPA-202ENST00000368069 GLG1Q92896 1179 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 FMO2Q99518 471 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 ZNF185O15231 689 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
COPA-202ENST00000368069 MAPK4P31152 587 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 DR1Q01658 176 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 TROAPQ12815 778 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 QRICH1Q2TAL8 776 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 IL17RAQ96F46 866 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 ANKFY1Q9P2R3 1169 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 DNAJC12Q9UKB3 198 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 P3H4Q92791 437 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 ANAPC4Q9UJX5 808 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
COPA-202ENST00000368069 ZNF148Q9UQR1 794 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
COPA-202ENST00000368069 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 CCDC188H7C350 402 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 ZSCAN20P17040 1043 aaPredicted RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 CRKP46108 304 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 SLCO1A2P46721 670 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 POLGP54098 1239 aaPredicted RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 NTRK3Q16288 839 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 SGO2Q562F6 1265 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 CCDC197Q8NCU1 140 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 PPFIBP2Q8ND30 876 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 COG1Q8WTW3 980 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 RSAD2Q8WXG1 361 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 ARHGEF2Q92974 986 aaKnown RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 HMGB1P1B2RPK0 211 aaPredicted RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 STXBP3O00186 592 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 NDC80O14777 642 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 ECEL1O95672 775 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 HSPA6P17066 643 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 KNOP1Q1ED39 458 aaKnown RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 CFAP157Q5JU67 520 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 KSR1Q8IVT5 923 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 SPATA4Q8NEY3 305 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 NPR1P16066 1061 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 PCK1P35558 622 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 BPIFB4P59827 614 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 ZNF354CQ86Y25 554 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 GIMAP8Q8ND71 665 aaPredicted RBP12.67□□□□□ -0.38
COPA-202ENST00000368069 MCUR1Q96AQ8 359 aa12.67□□□□□ -0.38
COPA-202ENST00000368069 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 ITPK1Q13572 414 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 FBXO33Q7Z6M2 555 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 TAB3Q8N5C8 712 aaPredicted RBP12.66□□□□□ -0.38
COPA-202ENST00000368069 SNX12Q9UMY4 172 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 COMMD10Q9Y6G5 202 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
COPA-202ENST00000368069 YWHAEP62258 255 aaKnown RBP12.66□□□□□ -0.38
COPA-202ENST00000368069 BFSP1Q12934 665 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 PALM2Q8IXS6 379 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 BBOF1Q8ND07 529 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 SLC17A8Q8NDX2 589 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
COPA-202ENST00000368069 PCDHB4Q9Y5E5 795 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 CIB2O75838 187 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 NFIXQ14938 502 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 NAALADL2Q58DX5 795 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 CTAGE3PQ8IX95 158 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 FBXL16Q8N461 479 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 ATP6V0A1Q93050 837 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
COPA-202ENST00000368069 STAM2O75886 525 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 CLTAP09496 248 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
COPA-202ENST00000368069 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms