RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CD276Q5ZPR3 534 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 OGFOD2Q6N063 350 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 TMEFF1Q8IYR6 380 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 FAM84AQ96KN4 292 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 NOX5Q96PH1 765 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 TTC1Q99614 292 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 RNF38Q9H0F5 515 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 ADAMTS20P59510 1910 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 FARP2O94887 1054 aaPredicted RBP6□□□□□ -1.45
RNU6-560P-201ENST00000364007 MMEP08473 750 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 NCLP19338 710 aaKnown RBP6□□□□□ -1.45
RNU6-560P-201ENST00000364007 LSSP48449 732 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 CDKN1CP49918 316 aaPredicted RBP6□□□□□ -1.45
RNU6-560P-201ENST00000364007 STAT4Q14765 748 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZNF174Q15697 407 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 CATSPEREQ5SY80 951 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 PHF19Q5T6S3 580 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 CC2D1AQ6P1N0 951 aaPredicted RBP6□□□□□ -1.45
RNU6-560P-201ENST00000364007 TMC5Q6UXY8 1006 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 LIPIQ6XZB0 460 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 B3GNT8Q7Z7M8 397 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 ATL2Q8NHH9 583 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 IFT22Q9H7X7 185 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 SLC39A2Q9NP94 309 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 EMC7Q9NPA0 242 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 HSPBP1Q9NZL4 362 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 FAN1Q9Y2M0 1017 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 SPO11Q9Y5K1 396 aa6□□□□□ -1.45
RNU6-560P-201ENST00000364007 FOXP2O15409 715 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 TMEM253P0C7T8 217 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 C1QTNF9P0C862 333 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 SDHAP31040 664 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 PFKPQ01813 784 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 DBPQ10586 325 aaPredicted RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 SSPNQ14714 243 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 ATG14Q6ZNE5 492 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZC3H18Q86VM9 953 aaKnown RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZCRB1Q8TBF4 217 aaKnown RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 WDR66Q8TBY9 1149 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 ERCC4Q92889 916 aaPredicted RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 GBP4Q96PP9 640 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 GORASP1Q9BQQ3 440 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 BRINP2Q9C0B6 783 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 MS4A5Q9H3V2 200 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 PCIF1Q9H4Z3 704 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 EPB41L4AQ9HCS5 686 aaPredicted RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 ACSS2Q9NR19 701 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 TOMM22Q9NS69 142 aa5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 NOP58Q9Y2X3 529 aaKnown RBP5.99□□□□□ -1.45
RNU6-560P-201ENST00000364007 PAX4O43316 350 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZEB2O60315 1214 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 PLA2G1BP04054 148 aaKnown RBP5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 CYP2C8P10632 490 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 GLDCP23378 1020 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 MC4RP32245 332 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 TMPRSS15P98073 1019 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 ATP13A4Q4VNC1 1196 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 RPUSD2Q8IZ73 545 aaKnown RBP5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 EFHBQ8N7U6 833 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 PRPF38AQ8NAV1 312 aaKnown RBP5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 ASB15Q8WXK1 588 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 SIGLEC10Q96LC7 697 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 UCKL1Q9NWZ5 548 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 BTBD7Q9P203 1132 aa5.98□□□□□ -1.45
RNU6-560P-201ENST00000364007 PHLDB1Q86UU1 1377 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 hCG_2014768A0A024R1R8 64 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 PRAMEF22A3QJZ6 481 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 LCHNA4D1U4 455 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 GOLGA6L22H0YM25 854 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 GPR39O43194 453 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 CYP17A1P05093 508 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ENO2P09104 434 aaPredicted RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 MED14OSP0DP75 135 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 CPEP16870 476 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 AOAHP28039 575 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ITGA1P56199 1179 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 HERVK_113P62684 666 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 SMAD3P84022 425 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ADAM9Q13443 819 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 SMAD4Q13485 552 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 FAM50AQ14320 339 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 RTP5Q14D33 572 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 SMAD2Q15796 467 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 BROXQ5VW32 411 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 PRAMEF18Q5VWM3 479 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ESRP1Q6NXG1 681 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 COG1Q8WTW3 980 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 C16orf92Q96LL3 132 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZSWIM3Q96MP5 696 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 C11orf84Q9BUA3 381 aaPredicted RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZMAT4Q9H898 229 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 VTA1Q9NP79 307 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 NGRNQ9NPE2 291 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ARHGAP28Q9P2N2 729 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 MCM8Q9UJA3 840 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 SMG5Q9UPR3 1016 aaKnown RBP5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 IRAK3Q9Y616 596 aa5.97□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZNF839A8K0R7 811 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms