RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LINC00116Q8NCU8 138 aa17.75■□□□□ 0.43
SCAF1-201ENST00000360565 KMT5AQ9NQR1 393 aa17.75■□□□□ 0.43
SCAF1-201ENST00000360565 ZNF148Q9UQR1 794 aa17.75■□□□□ 0.43
SCAF1-201ENST00000360565 GOLGA8IPA6NC78 632 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 GOLGA8JA6NMD2 632 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 ALS2CLQ60I27 953 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 DCAF15Q66K64 600 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 PODNQ7Z5L7 613 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 ATP6V0A1Q93050 837 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.74■□□□□ 0.437e-7■■■□□ 15.5
SCAF1-201ENST00000360565 PPP1R3GB7ZBB8 358 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 NCAPHQ15003 741 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 KAZNQ674X7 775 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
SCAF1-201ENST00000360565 KSR1Q8IVT5 923 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 WHAMMQ8TF30 809 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 DNAJC12Q9UKB3 198 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 BCS1LQ9Y276 419 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 H0YCG3 227 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 KNOP1Q1ED39 458 aaKnown RBP17.74■□□□□ 0.43
SCAF1-201ENST00000360565 PPP1R18Q6NYC8 613 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 REXO1L1PQ8IX06 675 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 MASTLQ96GX5 879 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 FAM20AQ96MK3 541 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■□□□ 12.6
SCAF1-201ENST00000360565 RAB20Q9NX57 234 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 SEPT9Q9UHD8 586 aaPredicted RBP17.74■□□□□ 0.43
SCAF1-201ENST00000360565 FLT1P17948 1338 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 FGGP02679 453 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 SRGNP10124 158 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 ADRA2BP18089 450 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 RCSD1Q6JBY9 416 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 METTL13Q8N6R0 699 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.74■□□□□ 0.43
SCAF1-201ENST00000360565 DAGLAQ9Y4D2 1042 aa17.74■□□□□ 0.43
SCAF1-201ENST00000360565 VGLL3A8MV65 326 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 SNX1Q13596 522 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 FYB2Q5VWT5 728 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 TAB3Q8N5C8 712 aaPredicted RBP17.73■□□□□ 0.43
SCAF1-201ENST00000360565 GRK7Q8WTQ7 553 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 PACSIN2Q9UNF0 486 aaPredicted RBP17.73■□□□□ 0.43
SCAF1-201ENST00000360565 RIMBP3CA6NJZ7 1639 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 RIMBP3BA6NNM3 1639 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 RIMBP3Q9UFD9 1639 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 ITIH6Q6UXX5 1313 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 STXBP3O00186 592 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 MAPK4P31152 587 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 GGCXP38435 758 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 ZNF354CQ86Y25 554 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 ATF2P15336 505 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 NR1D1P20393 614 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 INTS5Q6P9B9 1019 aaKnown RBP17.73■□□□□ 0.43
SCAF1-201ENST00000360565 RNF10Q8N5U6 811 aaKnown RBP17.73■□□□□ 0.43
SCAF1-201ENST00000360565 VTI1AQ96AJ9 217 aa17.73■□□□□ 0.43
SCAF1-201ENST00000360565 RIOK1Q9BRS2 568 aaKnown RBP17.73■□□□□ 0.43
SCAF1-201ENST00000360565 INTS9Q9NV88 658 aaKnown RBP17.73■□□□□ 0.43
SCAF1-201ENST00000360565 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
SCAF1-201ENST00000360565 PDIA5Q14554 519 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
SCAF1-201ENST00000360565 MMS19Q96T76 1030 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 MYMKA6NI61 221 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 TMOD1P28289 359 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 BPIFB4P59827 614 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 ELOA2Q8IYF1 753 aaPredicted RBP17.72■□□□□ 0.43
SCAF1-201ENST00000360565 FMO2Q99518 471 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 PIK3CAP42336 1068 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 PEX3P56589 373 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 PHLDB2Q86SQ0 1253 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 FBXL16Q8N461 479 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 TBC1D16Q8TBP0 767 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 L2HGDHQ9H9P8 463 aa17.72■□□□□ 0.43
SCAF1-201ENST00000360565 NOVA2Q9UNW9 492 aaKnown RBP17.72■□□□□ 0.43
SCAF1-201ENST00000360565 ZNF185O15231 689 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SLCO1A2P46721 670 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 PDCLQ13371 301 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 NAALADL2Q58DX5 795 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SPATS2Q86XZ4 545 aaKnown RBP17.71■□□□□ 0.43
SCAF1-201ENST00000360565 ZBTB8OSQ8IWT0 167 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 CTAGE3PQ8IX95 158 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SPATA4Q8NEY3 305 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 RUNDC3BQ96NL0 473 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 C7orf25Q9BPX7 421 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 COMMD10Q9Y6G5 202 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 ATP11AP98196 1134 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SGO2Q562F6 1265 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 TMEM191BP0C7N4 346 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 NAA25Q14CX7 972 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SEC23AQ15436 765 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 FAM160B2Q86V87 743 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 CCDC13Q8IYE1 715 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 RSAD2Q8WXG1 361 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SLC7A3Q8WY07 619 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 PCDHB4Q9Y5E5 795 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 IVNS1ABPQ9Y6Y0 642 aa17.71■□□□□ 0.43
SCAF1-201ENST00000360565 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms