RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PPP2R2DQ66LE6 453 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 NIPA1Q7RTP0 329 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 UIMC1Q96RL1 719 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 VPS54Q9P1Q0 977 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 ZNF215Q9UL58 517 aaPredicted RBP19.46■□□□□ 0.71
BRCC3-202ENST00000340647 NRCAMQ92823 1304 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 ABHD14A-ACY1A0A1B0GW23 586 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 DTNBO60941 627 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 CTSHP09668 335 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 MGAT3Q09327 533 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 NPY5RQ15761 445 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 RPAINQ86UA6 219 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 SYMPKQ92797 1274 aaKnown RBP19.45■□□□□ 0.7
BRCC3-202ENST00000340647 LENG9Q96B70 501 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 ZNF274Q96GC6 653 aaPredicted RBP19.45■□□□□ 0.7
BRCC3-202ENST00000340647 GLT8D2Q9H1C3 349 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 EHMT1Q9H9B1 1298 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 ERAP1Q9NZ08 941 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 CYP46A1Q9Y6A2 500 aa19.45■□□□□ 0.7
BRCC3-202ENST00000340647 GRIK4Q16099 956 aa19.44■□□□□ 0.7
BRCC3-202ENST00000340647 ABHD15Q6UXT9 468 aa19.44■□□□□ 0.7
BRCC3-202ENST00000340647 AIFM3Q96NN9 605 aa19.44■□□□□ 0.7
BRCC3-202ENST00000340647 SMARCAD1Q9H4L7 1026 aa19.44■□□□□ 0.7
BRCC3-202ENST00000340647 CERS4Q9HA82 394 aa19.44■□□□□ 0.7
BRCC3-202ENST00000340647 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.43■□□□□ 0.7
BRCC3-202ENST00000340647 M0R2N6 131 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 CAND2O75155 1236 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 GJB5O95377 273 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 INSRRP14616 1297 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 ATP4AP20648 1035 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 CIITAP33076 1130 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 PPFIA1Q13136 1202 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 PLCB4Q15147 1175 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 TJAP1Q5JTD0 557 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 PLA2G4DQ86XP0 818 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 REXO1Q8N1G1 1221 aaKnown RBP19.43■□□□□ 0.7
BRCC3-202ENST00000340647 TRAPPC12Q8WVT3 735 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 IL17RAQ96F46 866 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 NLRC5Q86WI3 1866 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 COL4A6Q14031 1691 aa19.43■□□□□ 0.7
BRCC3-202ENST00000340647 TTC3P53804 2025 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 LPXNO60711 386 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 SEC24BO95487 1268 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 GNAT1P11488 350 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 IKBKEQ14164 716 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 KRT40Q6A162 431 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 PLPPR4Q7Z2D5 763 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 CCDC60Q8IWA6 550 aaPredicted RBP19.42■□□□□ 0.7
BRCC3-202ENST00000340647 GLG1Q92896 1179 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 C6orf50Q9HD87 102 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 ATG2AQ2TAZ0 1938 aa19.42■□□□□ 0.7
BRCC3-202ENST00000340647 DDX39AO00148 427 aaKnown RBP19.41■□□□□ 0.7
BRCC3-202ENST00000340647 TLL1O43897 1013 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 POU3F3P20264 500 aaPredicted RBP19.41■□□□□ 0.7
BRCC3-202ENST00000340647 KCNJ6P48051 423 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 SCRN1Q12765 414 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 DNAJB3Q8WWF6 145 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 GAS2L1Q99501 681 aaPredicted RBP19.41■□□□□ 0.7
BRCC3-202ENST00000340647 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 PDRG1Q9NUG6 133 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 TUBE1Q9UJT0 475 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 TPCN1Q9ULQ1 816 aa19.41■□□□□ 0.7
BRCC3-202ENST00000340647 ZBTB42B2RXF5 422 aa19.4■□□□□ 0.7
BRCC3-202ENST00000340647 IPO5O00410 1097 aaKnown RBP19.4■□□□□ 0.7
BRCC3-202ENST00000340647 GNA11P29992 359 aa19.4■□□□□ 0.7
BRCC3-202ENST00000340647 STAT5BP51692 787 aa19.4■□□□□ 0.7
BRCC3-202ENST00000340647 STK3Q13188 491 aa19.4■□□□□ 0.7
BRCC3-202ENST00000340647 SH3GLB2Q9NR46 395 aa19.4■□□□□ 0.7
BRCC3-202ENST00000340647 CTDNEP1O95476 244 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 IGFBP4P22692 258 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 ZNF76P36508 570 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 IGBP1P78318 339 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 HTRA4P83105 476 aaPredicted RBP19.39■□□□□ 0.69
BRCC3-202ENST00000340647 LPIN1Q14693 890 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 FAM117BQ6P1L5 589 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 TAF2Q6P1X5 1199 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 CCDC12Q8WUD4 166 aaPredicted RBP19.39■□□□□ 0.69
BRCC3-202ENST00000340647 PPM1EQ8WY54 764 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 RAD9AQ99638 391 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 AGO3Q9H9G7 860 aaKnown RBP19.39■□□□□ 0.69
BRCC3-202ENST00000340647 MTCH2Q9Y6C9 303 aa19.39■□□□□ 0.69
BRCC3-202ENST00000340647 LINC01553A4QN01 128 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 TNFRSF10AO00220 468 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 EFCAB14O75071 495 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 AKAP17AQ02040 695 aaKnown RBP19.38■□□□□ 0.69
BRCC3-202ENST00000340647 SSRP1Q08945 709 aaKnown RBP19.38■□□□□ 0.69
BRCC3-202ENST00000340647 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
BRCC3-202ENST00000340647 ARNTL2Q8WYA1 636 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 GJA10Q969M2 543 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 TOP1MTQ969P6 601 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 GJB4Q9NTQ9 266 aa19.38■□□□□ 0.69
BRCC3-202ENST00000340647 RRN3P2A6NIE6 340 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 KIF28PB7ZC32 967 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 MSH4O15457 936 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 LARGE1O95461 756 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 GHRP10912 638 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 PRR16Q569H4 304 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 FBXO47Q5MNV8 452 aa19.37■□□□□ 0.69
BRCC3-202ENST00000340647 MCTP2Q6DN12 878 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms