RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 FAM86B1E9PN63 330 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 RBAK-RBAKDNI3L0D1 243 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 CETN3O15182 167 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 FAM86B2P0C5J1 330 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 MYBP10242 640 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 SLC18A3Q16572 532 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 DNAJC21Q5F1R6 531 aaKnown RBP16.62■□□□□ 0.25
CSDC2-201ENST00000306149 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
CSDC2-201ENST00000306149 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 HOXD13P35453 343 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 USP11P51784 963 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 SPIRE1Q08AE8 756 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 KCNA1Q09470 495 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 GIT2Q14161 759 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 TRADDQ15628 312 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 NAB2Q15742 525 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 RNF10Q8N5U6 811 aaKnown RBP16.62■□□□□ 0.25
CSDC2-201ENST00000306149 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 EHD4Q9H223 541 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
CSDC2-201ENST00000306149 HDAC9Q9UKV0 1011 aa16.62■□□□□ 0.25
CSDC2-201ENST00000306149 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 GOLGA6DP0CG33 693 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 SPATA31C1P0DKV0 1188 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 CARSP49589 748 aaKnown RBP16.61■□□□□ 0.25
CSDC2-201ENST00000306149 ASIC2Q16515 512 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 CFAP221Q4G0U5 840 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 DCAF17Q5H9S7 520 aaPredicted RBP16.61■□□□□ 0.25
CSDC2-201ENST00000306149 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 ETNPPLQ8TBG4 499 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
CSDC2-201ENST00000306149 SH3GL2Q99962 352 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 GANQ9H2C0 597 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 GOLGA6AQ9NYA3 693 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 SMCHD1A6NHR9 2005 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 UBR3Q6ZT12 1888 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 KLRG2A4D1S0 409 aaPredicted RBP16.61■□□□□ 0.25
CSDC2-201ENST00000306149 GNA14O95837 355 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 EPHB4P54760 987 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 PTK2Q05397 1052 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 SUGT1Q9Y2Z0 365 aa16.61■□□□□ 0.25
CSDC2-201ENST00000306149 F5H6K3 240 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 CLIC2O15247 247 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 TRIM37O94972 964 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 FAM153BP0C7A2 387 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 POLD1P28340 1107 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 CASP4P49662 377 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 KLRC3Q07444 240 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 FAM153CQ494X1 144 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 PROCA1Q8NCQ7 364 aaPredicted RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 KRT12Q99456 494 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 FAM153AQ9UHL3 310 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 NFU1Q9UMS0 254 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 DNM3Q9UQ16 869 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 GOLGA8KD6RF30 607 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 MAGEA9P43362 315 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 CORO7P57737 925 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 JAG1P78504 1218 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 GUCY2DQ02846 1103 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 EMBQ6PCB8 327 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 ARL8AQ96BM9 186 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 BHMT2Q9H2M3 363 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 RGL1Q9NZL6 768 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 FAM198AQ9UFP1 575 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 TSKSQ9UJT2 592 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 THSD7AQ9UPZ6 1657 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 MARSP56192 900 aaKnown RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 ICA1Q05084 483 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 GJB7Q6PEY0 223 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 ZNF571Q7Z3V5 609 aaPredicted RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 CAVIN3Q969G5 261 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 LENG9Q96B70 501 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 SPAG5Q96R06 1193 aa16.6■□□□□ 0.25
CSDC2-201ENST00000306149 ARMCX3Q9UH62 379 aaPredicted RBP16.6■□□□□ 0.25
CSDC2-201ENST00000306149 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 CYP3A7-CYP3A51PA0A087WV96 503 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 GRID2IPA4D2P6 1211 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 AKAP3O75969 853 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 HEXIM1O94992 359 aaKnown RBP16.59■□□□□ 0.25
CSDC2-201ENST00000306149 CYP3A7P24462 503 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 GUCY2FP51841 1108 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 KNOP1Q1ED39 458 aaKnown RBP16.59■□□□□ 0.25
CSDC2-201ENST00000306149 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 AIPL1Q9NZN9 384 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
CSDC2-201ENST00000306149 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
CSDC2-201ENST00000306149 GLE1Q53GS7 698 aaKnown RBP16.59■□□□□ 0.25
CSDC2-201ENST00000306149 MEI1Q5TIA1 1274 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms