RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 GJA10Q969M2 543 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 CRACR2AQ9BSW2 395 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 FAM207AQ9NSI2 230 aaPredicted RBP17.76■□□□□ 0.43
LONRF3-201ENST00000304778 GOLGA6AQ9NYA3 693 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 ZNF70Q9UC06 446 aaPredicted RBP17.76■□□□□ 0.43
LONRF3-201ENST00000304778 PCDHA13Q9Y5I0 950 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 CAPN6Q9Y6Q1 641 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 A0A1W2PRG0 241 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 LCA5LO95447 670 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 FGFR1OPO95684 399 aaKnown RBP17.76■□□□□ 0.43
LONRF3-201ENST00000304778 LRRC63Q05C16 580 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 CCDC84Q86UT8 332 aaPredicted RBP17.76■□□□□ 0.43
LONRF3-201ENST00000304778 CDK5RAP3Q96JB5 506 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 SLC7A5Q01650 507 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 IKQ13123 557 aaPredicted RBP17.76■□□□□ 0.43
LONRF3-201ENST00000304778 ZNF572Q7Z3I7 529 aaPredicted RBP17.76■□□□□ 0.43
LONRF3-201ENST00000304778 CREG2Q8IUH2 290 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 GMCL1Q96IK5 515 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 NUDT12Q9BQG2 462 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 HDAC9Q9UKV0 1011 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
LONRF3-201ENST00000304778 PDIA5Q14554 519 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 HAS1Q92839 578 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 CAPS2Q9BXY5 557 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 ITIH3Q06033 890 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 CCNI2Q6ZMN8 369 aaPredicted RBP17.75■□□□□ 0.43
LONRF3-201ENST00000304778 DYMQ7RTS9 669 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 OGFOD1Q8N543 542 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 SELENOOQ9BVL4 669 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 RAB34Q9BZG1 259 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 CD248Q9HCU0 757 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 PSME4Q14997 1843 aa17.75■□□□□ 0.43
LONRF3-201ENST00000304778 BMP3P12645 472 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 PRLRP16471 622 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
LONRF3-201ENST00000304778 EIF4A3P38919 411 aaKnown RBP17.74■□□□□ 0.43
LONRF3-201ENST00000304778 PPP2R5AQ15172 486 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 CCDC70Q6NSX1 233 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 SPICE1Q8N0Z3 855 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 MMGT1Q8N4V1 131 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 RAD54LQ92698 747 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 MMRN2Q9H8L6 949 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
LONRF3-201ENST00000304778 GNGT1P63211 74 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 SYDE2Q5VT97 1194 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 LRRC55Q6ZSA7 311 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 GLT8D2Q9H1C3 349 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 MLXIPQ9HAP2 919 aa17.74■□□□□ 0.43
LONRF3-201ENST00000304778 PPP1R1BQ9UD71 204 aaPredicted RBP17.74■□□□□ 0.43
LONRF3-201ENST00000304778 MYH10P35580 1976 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 LRRC53A6NM62 1247 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 MEIS2O14770 477 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 ECE1P42892 770 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 EHHADHQ08426 723 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 PPFIA1Q13136 1202 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 USH1GQ495M9 461 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 RUBCNQ92622 972 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 SRCAPQ6ZRS2 3230 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 EIF3HO15372 352 aaKnown RBP eCLIP17.73■□□□□ 0.43
LONRF3-201ENST00000304778 AKR1B10O60218 316 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 MARCH6O60337 910 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 ZBTB7AO95365 584 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 MOCS3O95396 460 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 TAL1P17542 331 aaPredicted RBP17.73■□□□□ 0.43
LONRF3-201ENST00000304778 ERCC3P19447 782 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 CXCR5P32302 372 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 KRT79Q5XKE5 535 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 FOXR2Q6PJQ5 311 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 BAP1Q92560 729 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 ALS2CR12Q96Q35 445 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 ANO3Q9BYT9 981 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 VEZTQ9HBM0 779 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
LONRF3-201ENST00000304778 MYH7BA7E2Y1 1941 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 CNTNAP1P78357 1384 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 GCFC2P16383 781 aaKnown RBP17.73■□□□□ 0.43
LONRF3-201ENST00000304778 RRAGAQ7L523 313 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 FBXO11Q86XK2 927 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 P2RX7Q99572 595 aaKnown RBP17.73■□□□□ 0.43
LONRF3-201ENST00000304778 ARFGEF1Q9Y6D6 1849 aa17.73■□□□□ 0.43
LONRF3-201ENST00000304778 GRIN2DO15399 1336 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 FNTAP49354 379 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 PSMD2Q13200 908 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 TMEM119Q4V9L6 283 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 AENQ8WTP8 325 aaKnown RBP17.72■□□□□ 0.43
LONRF3-201ENST00000304778 DDX12PQ92771 950 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 LRRC27Q9C0I9 530 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 DMGDHQ9UI17 866 aaKnown RBP17.72■□□□□ 0.43
LONRF3-201ENST00000304778 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 HYOU1Q9Y4L1 999 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 TCP1P17987 556 aaKnown RBP17.72■□□□□ 0.43
LONRF3-201ENST00000304778 ELF1P32519 619 aa17.72■□□□□ 0.43
LONRF3-201ENST00000304778 RDXP35241 583 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms