RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 USP17L19D6RCP7 530 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 USP17L20D6RJB6 530 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 KIF4AO95239 1232 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 MNAT1P51948 309 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 USP17L24Q0WX57 530 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 USP17L6PQ6QN14 398 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 TEX2Q8IWB9 1127 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 CEP63Q96MT8 703 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 KRT18P05783 430 aaKnown RBP18.68■□□□□ 0.58
SPG7-201ENST00000268704 MYBP10242 640 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 HSPA9P38646 679 aaKnown RBP18.68■□□□□ 0.58
SPG7-201ENST00000268704 FNTAP49354 379 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 NT5C2P49902 561 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 MCTP2Q6DN12 878 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 KCTD1Q719H9 257 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 IRF2BP2Q7Z5L9 587 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 CD302Q8IX05 232 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 RBM46Q8TBY0 533 aaKnown RBP18.68■□□□□ 0.58
SPG7-201ENST00000268704 SPAG5Q96R06 1193 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 LRRC27Q9C0I9 530 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 BMP2KQ9NSY1 1161 aaPredicted RBP18.68■□□□□ 0.58
SPG7-201ENST00000268704 TMCO5BA8MYB1 307 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 MEIS1O00470 390 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 CYP11B2P19099 503 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 TMOD1P28289 359 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 GPSM2P81274 684 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 IFT88Q13099 833 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 DCAF17Q5H9S7 520 aaPredicted RBP18.68■□□□□ 0.58
SPG7-201ENST00000268704 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 GJB7Q6PEY0 223 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 CCDC65Q8IXS2 484 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 CD209Q9NNX6 404 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
SPG7-201ENST00000268704 USP17L10C9JJH3 530 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 RAD21O60216 631 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 SMARCA1P28370 1054 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 ARSHQ5FYA8 562 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 PPP4R3AQ6IN85 833 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 ISCUQ9H1K1 167 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 TMBIM4Q9HC24 238 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 NOC2LQ9Y3T9 749 aaKnown RBP18.67■□□□□ 0.58
SPG7-201ENST00000268704 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 MED24O75448 989 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 UFL1O94874 794 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 CNPY4Q8N129 248 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 METTL13Q8N6R0 699 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 AMACRQ9UHK6 382 aa18.67■□□□□ 0.58
SPG7-201ENST00000268704 DCDC2CA8MYV0 355 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 SART1O43290 800 aaKnown RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 UCHL3P15374 230 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 CTNNA1P35221 906 aaKnown RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 RFC4P35249 363 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 USP11P51784 963 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 PSMC6P62333 389 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 PRPF38AQ8NAV1 312 aaKnown RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 CELF4Q9BZC1 486 aaKnown RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 NAGPAQ9UK23 515 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 LEMD3Q9Y2U8 911 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 SPATA31A6Q5VVP1 1343 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 HMGB1P1B2RPK0 211 aaPredicted RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 CLK2P49760 499 aaKnown RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 ZNF844Q08AG5 666 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 GRAPQ13588 217 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 ASPRV1Q53RT3 343 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 DPY19L2P1Q6NXN4 242 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 LRRC57Q8N9N7 239 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 GRAPLQ8TC17 118 aaPredicted RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 UBLCP1Q8WVY7 318 aaPredicted RBP18.66■□□□□ 0.58
SPG7-201ENST00000268704 IKZF4Q9H2S9 585 aa18.66■□□□□ 0.58
SPG7-201ENST00000268704 COL24A1Q17RW2 1714 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 F8W031 263 aaPredicted RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 H0YGN5 161 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 DAPK3O43293 454 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 TCERG1LQ5VWI1 586 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 ALKBH5Q6P6C2 394 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 CUL5Q93034 780 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 FAM212AQ96EL1 285 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 FBXL5Q9UKA1 691 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 NFS1Q9Y697 457 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 CNTNAP4Q9C0A0 1308 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 PNMA6FA0A0J9YX94 578 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 GOLGA6L10A6NI86 522 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 GCOM1H8Y6P7 765 aaPredicted RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 GNA14O95837 355 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 MYZAPP0CAP1 466 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 MARSP56192 900 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 SCFD2Q8WU76 684 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 ARHGEF1Q92888 912 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 PLCB1Q9NQ66 1216 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 CETN3O15182 167 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 NOVP48745 357 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 SPRED3Q2MJR0 410 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 ARHGAP27Q6ZUM4 889 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
SPG7-201ENST00000268704 GEMIN8Q9NWZ8 242 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 RTCBQ9Y3I0 505 aaKnown RBP18.65■□□□□ 0.58
SPG7-201ENST00000268704 A6NNZ2 444 aa18.64■□□□□ 0.57
SPG7-201ENST00000268704 hCG_1984214I3L0E3 225 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms