RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 TMEM47Q9BQJ4 181 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 LRRC1Q9BTT6 524 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 MAGED2Q9UNF1 606 aaPredicted RBP14.67□□□□□ -0.06
TCF3-201ENST00000262965 COG7P83436 770 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 BBS9Q3SYG4 887 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 UNC13DQ70J99 1090 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 DGKHQ86XP1 1220 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 CDAN1Q8IWY9 1227 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 SPATA4Q8NEY3 305 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 DBNDD1Q9H9R9 158 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 PARVGQ9HBI0 331 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 TMEM260Q9NX78 707 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
TCF3-201ENST00000262965 TFR2Q9UP52 801 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 AFG3L2Q9Y4W6 797 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 DEPDC5O75140 1603 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 POLGP54098 1239 aaPredicted RBP14.67□□□□□ -0.06
TCF3-201ENST00000262965 CACNB3P54284 484 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 PDE1BQ01064 536 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
TCF3-201ENST00000262965 BEND6Q5SZJ8 279 aaPredicted RBP14.67□□□□□ -0.06
TCF3-201ENST00000262965 C10orf76Q5T2E6 689 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 GBP7Q8N8V2 638 aaPredicted RBP14.67□□□□□ -0.06
TCF3-201ENST00000262965 CSRNP1Q96S65 589 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 PAGR1Q9BTK6 254 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 SMARCAL1Q9NZC9 954 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 XDHP47989 1333 aa14.67□□□□□ -0.06
TCF3-201ENST00000262965 IRX4P78413 519 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 ZNF746Q6NUN9 644 aaPredicted RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 HEMGNQ9BXL5 484 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 CALN1Q9BXU9 219 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 SENP2Q9HC62 589 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 G3BP2Q9UN86 482 aaKnown RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 NOA1Q8NC60 698 aaKnown RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 BBOF1Q8ND07 529 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.66□□□□□ -0.06
TCF3-201ENST00000262965 HOOK2Q96ED9 719 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 SMYD2Q9NRG4 433 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 ZNF609O15014 1411 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 SPATA31D1Q6ZQQ2 1576 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 FAM196BA6NMK8 535 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 CYP2C19P33261 490 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 CEP120Q8N960 986 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 TC2NQ8N9U0 490 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 CNOT10Q9H9A5 744 aaKnown RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 FBXO2Q9UK22 296 aaPredicted RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 FDPSP14324 419 aaKnown RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 CD58P19256 250 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 CCDC17Q96LX7 622 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 ZNF408Q9H9D4 720 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 ACTR5Q9H9F9 607 aaPredicted RBP14.66□□□□□ -0.06
TCF3-201ENST00000262965 AGPAT5Q9NUQ2 364 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 DNAJC12Q9UKB3 198 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 ADGRB1O14514 1584 aa14.66□□□□□ -0.06
TCF3-201ENST00000262965 USP17L5A8MUK1 530 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 SART1O43290 800 aaKnown RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 POLR2BP30876 1174 aaKnown RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 GRIN1Q05586 938 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 LRRC14Q15048 493 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 SFR1Q86XK3 245 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 NXF1Q9UBU9 619 aaKnown RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 ATP10DQ9P241 1426 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 POTEB3A0JP26 581 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 POTECB2RU33 542 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 CCDC188H7C350 402 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 CUL1Q13616 776 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 NKX1-1Q15270 411 aaPredicted RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 GNPTABQ3T906 1256 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 HP1BP3Q5SSJ5 553 aaPredicted RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 AP1ARQ63HQ0 302 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 POTEBQ6S5H4 581 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 SRRM1Q8IYB3 904 aaKnown RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 CFAP57Q96MR6 1250 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 AP5Z1O43299 807 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 PSMD2Q13200 908 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 SLMAPQ14BN4 828 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 RPS6KA2Q15349 733 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 ATG9AQ7Z3C6 839 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 NME8Q8N427 588 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 MS4A14Q96JA4 679 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 ANO3Q9BYT9 981 aa14.65□□□□□ -0.06
TCF3-201ENST00000262965 SEPT9Q9UHD8 586 aaPredicted RBP14.65□□□□□ -0.06
TCF3-201ENST00000262965 NBPF26B4DH59 902 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 CHUKO15111 745 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 POLE2P56282 527 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 TAF12Q16514 161 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 NBPF10Q6P3W6 841 aaKnown RBP14.64□□□□□ -0.07
TCF3-201ENST00000262965 ARMC9Q7Z3E5 817 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 SRLQ86TD4 932 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 RFX6Q8HWS3 928 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 NBPF15Q8N660 670 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 HIPK4Q8NE63 616 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
TCF3-201ENST00000262965 DCP1AQ9NPI6 582 aaPredicted RBP14.64□□□□□ -0.07
TCF3-201ENST00000262965 CTIFO43310 598 aaKnown RBP14.64□□□□□ -0.07
TCF3-201ENST00000262965 CTDNEP1O95476 244 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms