RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 QPCTQ16769 361 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 SPATS2Q86XZ4 545 aaKnown RBP19.1■□□□□ 0.65
TRAM1-201ENST00000262213 CCDC13Q8IYE1 715 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 METTL13Q8N6R0 699 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 CEP63Q96MT8 703 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 RIOX1Q9H6W3 641 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 LRRC4CQ9HCJ2 640 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 AIPL1Q9NZN9 384 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 ESYT2A0FGR8 921 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 DCDC2CA8MYV0 355 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 CASP5P51878 434 aa19.1■□□□□ 0.65
TRAM1-201ENST00000262213 ALKBH5Q6P6C2 394 aaKnown RBP19.1■□□□□ 0.65
TRAM1-201ENST00000262213 CETN3O15182 167 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 USP11P51784 963 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 GJB7Q6PEY0 223 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 CCDC121Q6ZUS5 278 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 PEX26Q7Z412 305 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 CNOT8Q9UFF9 292 aaKnown RBP19.09■□□□□ 0.65
TRAM1-201ENST00000262213 NAV1Q8NEY1 1877 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 GOLGA6L7A0A1B0GV03 622 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 PGRMC1O00264 195 aaKnown RBP19.09■□□□□ 0.65
TRAM1-201ENST00000262213 TTI1O43156 1089 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 MYBP10242 640 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 PPP4CP60510 307 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 CCDC114Q96M63 670 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 NYXQ9GZU5 481 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 GEMIN8Q9NWZ8 242 aaKnown RBP19.09■□□□□ 0.65
TRAM1-201ENST00000262213 TMEM59LQ9UK28 342 aa19.09■□□□□ 0.65
TRAM1-201ENST00000262213 MEIS1O00470 390 aa19.08■□□□□ 0.65
TRAM1-201ENST00000262213 PPP1R11O60927 126 aaPredicted RBP19.08■□□□□ 0.65
TRAM1-201ENST00000262213 ORC2Q13416 577 aaPredicted RBP19.08■□□□□ 0.65
TRAM1-201ENST00000262213 SPRED3Q2MJR0 410 aa19.08■□□□□ 0.65
TRAM1-201ENST00000262213 IRF2BP2Q7Z5L9 587 aa19.08■□□□□ 0.65
TRAM1-201ENST00000262213 ARFGAP2Q8N6H7 521 aa19.08■□□□□ 0.65
TRAM1-201ENST00000262213 LRRC45Q96CN5 670 aa19.08■□□□□ 0.65
TRAM1-201ENST00000262213 KCTD10Q9H3F6 313 aa19.08■□□□□ 0.65
TRAM1-201ENST00000262213 POTEFA5A3E0 1075 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 GMNCA6NCL1 334 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 H0YGN5 161 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 GNA14O95837 355 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 POTEIP0CG38 1075 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 UCHL3P15374 230 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 ACTN3Q08043 901 aaPredicted RBP19.08■□□□□ 0.64
TRAM1-201ENST00000262213 POTEGQ6S5H5 508 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 POTEEQ6S8J3 1075 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 TPTE2Q6XPS3 522 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 SCFD2Q8WU76 684 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 DDX20Q9UHI6 824 aaKnown RBP19.08■□□□□ 0.64
TRAM1-201ENST00000262213 NAGPAQ9UK23 515 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 NFS1Q9Y697 457 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 MAST2Q6P0Q8 1798 aa19.08■□□□□ 0.64
TRAM1-201ENST00000262213 TM4SF1P30408 202 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 MAP2K2P36507 400 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 PRPF4BQ13523 1007 aaKnown RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 KRT71Q3SY84 523 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 PPP4R3AQ6IN85 833 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 DPP8Q6V1X1 898 aaPredicted RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 DAAM2Q86T65 1068 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 ADGRF4Q8IZF3 695 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 PBKQ96KB5 322 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 VCPKMTQ9H867 229 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 AJAP1Q9UKB5 411 aaPredicted RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 PCDHA2Q9Y5H9 948 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L15C9J2P7 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L13C9JLJ4 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L11C9JVI0 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L18D6R9N7 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L22D6RA61 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L17D6RBQ6 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L19D6RCP7 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L20D6RJB6 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 TOM1O60784 492 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 AKR1B1P15121 316 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 COPB2P35606 906 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 MAGOHP61326 146 aaKnown RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L24Q0WX57 530 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 CUL1Q13616 776 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 USP17L6PQ6QN14 398 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 ZNF804AQ7Z570 1209 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 U2AF1L4Q8WU68 220 aaKnown RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 MAGOHBQ96A72 148 aaKnown RBP19.07■□□□□ 0.64
TRAM1-201ENST00000262213 TRIM51Q9BSJ1 452 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 KLC4Q9NSK0 619 aa19.07■□□□□ 0.64
TRAM1-201ENST00000262213 ATXN2Q99700 1313 aaKnown RBP19.06■□□□□ 0.64
TRAM1-201ENST00000262213 IRS2Q9Y4H2 1338 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 CYP11B2P19099 503 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 DHX9Q08211 1270 aaKnown RBP19.06■□□□□ 0.64
TRAM1-201ENST00000262213 KCTD1Q719H9 257 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 PTF1AQ7RTS3 328 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 TPCN2Q8NHX9 752 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.06■□□□□ 0.644e-7■■□□□ 12
TRAM1-201ENST00000262213 JMJD4Q9H9V9 463 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 ARMCX3Q9UH62 379 aaPredicted RBP19.06■□□□□ 0.64
TRAM1-201ENST00000262213 PHF20L1A8MW92 1017 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 IFFO1Q0D2I5 559 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 EXOC3L4Q17RC7 722 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 LRIG3Q6UXM1 1119 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 LRRC57Q8N9N7 239 aa19.06■□□□□ 0.64
TRAM1-201ENST00000262213 MDM1Q8TC05 714 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms